RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 DNAJB7Q7Z6W7 309 aaPredicted RBP16.86■□□□□ 0.29
TRIM27-201ENST00000377194 DCBLD1Q8N8Z6 715 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 OR6K2Q8NGY2 324 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 ADAMTS19Q8TE59 1207 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 AUTS2Q8WXX7 1259 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 ROPN1LQ96C74 230 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 TRIM15Q9C019 465 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 ADNPQ9H2P0 1102 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 SARS2Q9NP81 518 aaKnown RBP16.86■□□□□ 0.29
TRIM27-201ENST00000377194 CMTM6Q9NX76 183 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 ATP11BQ9Y2G3 1177 aa16.86■□□□□ 0.29
TRIM27-201ENST00000377194 CPNE6O95741 557 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 CXCL10P02778 98 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 ALPIP09923 528 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 MBL2P11226 248 aaPredicted RBP16.85■□□□□ 0.29
TRIM27-201ENST00000377194 CTPS1P17812 591 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 CES1P23141 567 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 TTPAP49638 278 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 PLA2G16P53816 162 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 OCA2Q04671 838 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 OTUD3Q5T2D3 398 aaPredicted RBP16.85■□□□□ 0.29
TRIM27-201ENST00000377194 XAF1Q6GPH4 301 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 SCIMPQ6UWF3 145 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 SYVN1Q86TM6 617 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 IFNEQ86WN2 208 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 ZNF641Q96N77 438 aaPredicted RBP16.85■□□□□ 0.29
TRIM27-201ENST00000377194 MUS81Q96NY9 551 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 PSD2Q9BQI7 771 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 KLHL3Q9UH77 587 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 OR51B4Q9Y5P0 310 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 KLK8O60259 260 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 GREM1O60565 184 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 VPS26AO75436 327 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 SEC14L2O76054 403 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 CA5AP35218 305 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 RPS9P46781 194 aaKnown RBP16.85■□□□□ 0.29
TRIM27-201ENST00000377194 CAMK2BQ13554 666 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 CYP51A1Q16850 503 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 CCNYL2Q5T2Q4 361 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 ZNF773Q6PK81 442 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 TAS2R42Q7RTR8 314 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 TRPV3Q8NET8 790 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 RAB2BQ8WUD1 216 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 LINGO1Q96FE5 620 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 ACOX2Q99424 681 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 TUBA1CQ9BQE3 449 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 PCDH10Q9P2E7 1040 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 PCTPQ9UKL6 214 aa16.85■□□□□ 0.29
TRIM27-201ENST00000377194 ARPC2O15144 300 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 INPP4BO15327 924 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 FZD6O60353 706 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 MAN1A2O60476 641 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 BCAS1O75363 584 aaPredicted RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 ALDH4A1P30038 563 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 SHMT2P34897 504 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 AGAP7PQ5VUJ5 663 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 LCN8Q6JVE9 175 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 TBPL2Q6SJ96 375 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 NKAPQ8N5F7 415 aaKnown RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 TEX37Q96LM6 180 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 TM6SF2Q9BZW4 377 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 LTB4R2Q9NPC1 389 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 SDR39U1Q9NRG7 319 aaPredicted RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 IL17CQ9P0M4 197 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 ABCD2Q9UBJ2 740 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 TRMT6Q9UJA5 497 aaKnown RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 TSR3Q9UJK0 312 aaKnown RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 STOML2Q9UJZ1 356 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 RSL1D1O76021 490 aaKnown RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 SOD2P04179 222 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 NCK1P16333 377 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 IL7RP16871 459 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 LBPP18428 481 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 CSKP41240 450 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 RHOAP61586 193 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 TXNDC8Q6A555 127 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 CRTC3Q6UUV7 619 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 FRA10AC1Q70Z53 315 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 ANKRD13BQ86YJ7 626 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 MIER2Q8N344 545 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 ARL14EPQ8N8R7 260 aaPredicted RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 VWCEQ96DN2 955 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 CLIP3Q96DZ5 547 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 ALG14Q96F25 216 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 TRMT2BQ96GJ1 504 aaKnown RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 ATP13A3Q9H7F0 1226 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 ZNF334Q9HCZ1 680 aaPredicted RBP16.84■□□□□ 0.29
TRIM27-201ENST00000377194 SLC52A3Q9NQ40 469 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 ACTR3BQ9P1U1 418 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 PDE4DIPQ5VU43 2346 aa16.84■□□□□ 0.29
TRIM27-201ENST00000377194 SMAD6O43541 496 aaKnown RBP16.83■□□□□ 0.29
TRIM27-201ENST00000377194 TGM1P22735 817 aa16.83■□□□□ 0.29
TRIM27-201ENST00000377194 IL2P60568 153 aa16.83■□□□□ 0.29
TRIM27-201ENST00000377194 IFITM2Q01629 132 aa16.83■□□□□ 0.29
TRIM27-201ENST00000377194 PARP8Q8N3A8 854 aa16.83■□□□□ 0.29
TRIM27-201ENST00000377194 ZNF296Q8WUU4 475 aaPredicted RBP16.83■□□□□ 0.29
TRIM27-201ENST00000377194 DEFB118Q96PH6 123 aa16.83■□□□□ 0.29
TRIM27-201ENST00000377194 HOPXQ9BPY8 73 aaPredicted RBP16.83■□□□□ 0.29
TRIM27-201ENST00000377194 FUNDC2Q9BWH2 189 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms