RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 PADI1Q9ULC6 663 aa11.9□□□□□ -0.5
LSM2-208ENST00000375661 PRKAB1Q9Y478 270 aa11.9□□□□□ -0.5
LSM2-208ENST00000375661 TCAF1Q9Y4C2 921 aa11.9□□□□□ -0.5
LSM2-208ENST00000375661 PCYT1BQ9Y5K3 369 aaPredicted RBP11.9□□□□□ -0.5
LSM2-208ENST00000375661 OAS3Q9Y6K5 1087 aaKnown RBP11.9□□□□□ -0.5
LSM2-208ENST00000375661 NBPF19A0A087WUL8 3843 aa11.9□□□□□ -0.5
LSM2-208ENST00000375661 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 CDC14CA4D256 554 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 ENO4A6NNW6 628 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 FADS2P1A8MWK0 482 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 AP3B1O00203 1094 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 CCL22O00626 93 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 KATNA1O75449 491 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 KIAA0754O94854 1291 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 UBXN7O94888 489 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 VIPP01282 170 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 FURINP09958 794 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 SPAM1P38567 509 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 MAGEA3P43357 314 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 DCDC1P59894 354 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 CRADDP78560 199 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 TMPRSS15P98073 1019 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 XIAPP98170 497 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 SLC7A5Q01650 507 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 DNASE1L3Q13609 305 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 MORF4L2Q15014 288 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 PCID2Q5JVF3 399 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 DNTTIP2Q5QJE6 756 aaKnown RBP11.89□□□□□ -0.51
LSM2-208ENST00000375661 C8orf74Q6P047 294 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 PPP1R3BQ86XI6 285 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 MPP5Q8N3R9 675 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 CPT1CQ8TCG5 803 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 DTX3LQ8TDB6 740 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 THAP4Q8WY91 577 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 DNAJC1Q96KC8 554 aaKnown RBP11.89□□□□□ -0.51
LSM2-208ENST00000375661 ZNF778Q96MU6 729 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 PWWP2AQ96N64 755 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 C19orf43Q9BQ61 176 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 GPR87Q9BY21 358 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 IL22Q9GZX6 179 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 TWSG1Q9GZX9 223 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 RAB33BQ9H082 229 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
LSM2-208ENST00000375661 CHRAC1Q9NRG0 131 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 SYBUQ9NX95 663 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 GRHL1Q9NZI5 618 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 BFARQ9NZS9 450 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 OGFRQ9NZT2 677 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 WHRNQ9P202 907 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 FKBPLQ9UIM3 349 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 TMPRSS11EQ9UL52 423 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 PKP3Q9Y446 797 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 PCDHGA9Q9Y5G4 932 aaKnown RBP11.89□□□□□ -0.51
LSM2-208ENST00000375661 SPTAN1Q13813 2472 aaKnown RBP11.89□□□□□ -0.51
LSM2-208ENST00000375661 ESPL1Q14674 2120 aa11.89□□□□□ -0.51
LSM2-208ENST00000375661 PIPSLA2A3N6 862 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 CCDC78A2IDD5 438 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 HEATR9A2RTY3 570 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 SPAG6O75602 509 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 AMD1P17707 334 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 GNLYP22749 145 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 VARSP26640 1264 aaKnown RBP11.88□□□□□ -0.51
LSM2-208ENST00000375661 UQCRFS1P47985 274 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 DRG2P55039 364 aaKnown RBP11.88□□□□□ -0.51
LSM2-208ENST00000375661 PDE1BQ01064 536 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 CHRNA6Q15825 494 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 MSS51Q4VC12 460 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 FNBP1LQ5T0N5 605 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 TSTD2Q5T7W7 516 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 ZDHHC20Q5W0Z9 365 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 FAM151BQ6UXP7 276 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 BPHLQ86WA6 291 aaPredicted RBP11.88□□□□□ -0.51
LSM2-208ENST00000375661 TRIM48Q8IWZ4 208 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 RBM12BQ8IXT5 1001 aaKnown RBP11.88□□□□□ -0.51
LSM2-208ENST00000375661 TRAM1L1Q8N609 369 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 PPHLN1Q8NEY8 458 aaKnown RBP11.88□□□□□ -0.51
LSM2-208ENST00000375661 OR13J1Q8NGT2 312 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 STYXQ8WUJ0 223 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 KLHL6Q8WZ60 621 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 ZDHHC12Q96GR4 267 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 CDKN2AIPNLQ96HQ2 116 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 SIGLEC10Q96LC7 697 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 TGM7Q96PF1 710 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 KIFC1Q9BW19 673 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 RAB17Q9H0T7 212 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 TRIM39Q9HCM9 518 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 LHX9Q9NQ69 397 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 POT1Q9NUX5 634 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 NLE1Q9NVX2 485 aaPredicted RBP11.88□□□□□ -0.51
LSM2-208ENST00000375661 EPHA6Q9UF33 1036 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 SLC2A6Q9UGQ3 507 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 DMGDHQ9UI17 866 aaKnown RBP11.88□□□□□ -0.51
LSM2-208ENST00000375661 LNPEPQ9UIQ6 1025 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 ANAPC5Q9UJX4 755 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 UTP11Q9Y3A2 253 aaKnown RBP11.88□□□□□ -0.51
LSM2-208ENST00000375661 PCDHGB7Q9Y5F8 929 aa11.88□□□□□ -0.51
LSM2-208ENST00000375661 GLYATL1P3A0A0U1RQE8 302 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SDR42E2A6NKP2 422 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms