RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 KAT2AQ92830 837 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 ERVK-5Q9HDB9 667 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 MKKSQ9NPJ1 570 aaPredicted RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 ERVK-11Q9UQG0 969 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 PCDHA2Q9Y5H9 948 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 SLC22A2O15244 555 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 LRCH4O75427 683 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 TIE1P35590 1138 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 BLKP51451 505 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 TREML2Q5T2D2 321 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 NPAS4Q8IUM7 802 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 TTLQ8NG68 377 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 NIFKQ9BYG3 293 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 EIF2B3Q9NR50 452 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 TLL2Q9Y6L7 1015 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 ACVR2AP27037 513 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 DGKGP49619 791 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 CRISP3P54108 245 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 FUT10Q6P4F1 479 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 FBXO15Q8NCQ5 510 aaPredicted RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 EMID1Q96A84 441 aaPredicted RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 MCCC2Q9HCC0 563 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ARHGEF4Q9NR80 690 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 FCF1Q9Y324 198 aaKnown RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 PI15O43692 258 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 CDC40O60508 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
VCL-202ENST00000372755 TSPAN1O60635 241 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 IL7RP16871 459 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 MAGP20916 626 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ARSHQ5FYA8 562 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ZNF613Q6PF04 617 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 USP43Q70EL4 1123 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ZNF548Q8NEK5 533 aaPredicted RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 SGCDQ92629 289 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 GAL3ST3Q96A11 431 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 TBC1D17Q9HA65 648 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 MRPS30Q9NP92 439 aaKnown RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 C12orf4Q9NQ89 552 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 DKK3Q9UBP4 350 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 PRAMEF33A0A0G2JMD5 474 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 OR1I1O60431 355 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 PRAMEF10O60809 474 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 PRH1P02810 166 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 RPS14P62263 151 aaKnown RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 VLDLRP98155 873 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ECT2LQ008S8 904 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 CA9Q16790 459 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 LACTB2Q53H82 288 aaPredicted RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 CCSAPQ6IQ19 270 aaPredicted RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 PAOXQ6QHF9 649 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ZDHHC21Q8IVQ6 265 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 OR8H1Q8NGG4 311 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 TOP1MTQ969P6 601 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 PMEPA1Q969W9 287 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 COQ8BQ96D53 544 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 TMCO6Q96DC7 493 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 CAMK1GQ96NX5 476 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 KAT8Q9H7Z6 458 aaKnown RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 DNAAF2Q9NVR5 837 aaKnown RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 GRIN2DO15399 1336 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 hCG_2039718K7EN88 272 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 PIP5K1BO14986 540 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 SLC7A4O43246 635 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ITIH1P19827 911 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 QPCTQ16769 361 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ABCA11PQ4W5N1 156 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 SLC8B1Q6J4K2 584 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 LDB1Q86U70 411 aaPredicted RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 ARMC10Q8N2F6 343 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 TMEM145Q8NBT3 493 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 OR10A6Q8NH74 314 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 DCAKDQ8WVC6 231 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 TRNAU1APQ9NX07 287 aaKnown RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 ZNF224Q9NZL3 707 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 CNTN6Q9UQ52 1028 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 RPL36Q9Y3U8 105 aaKnown RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 PCDHGB1Q9Y5G3 927 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ZNF20P17024 532 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 BMP6P22004 513 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ECM1Q16610 540 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 PAMR1Q6UXH9 720 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 VITQ6UXI7 678 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 LINGO2Q7L985 606 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 TAC4Q86UU9 113 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 MPP5Q8N3R9 675 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 OR5K1Q8NHB7 308 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 PTPN18Q99952 460 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 C14orf105Q9NVL8 296 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 ALKBH4Q9NXW9 302 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 LGALS13Q9UHV8 139 aa11.36□□□□□ -0.59
VCL-202ENST00000372755 EIF2B4Q9UI10 523 aaKnown RBP11.36□□□□□ -0.59
VCL-202ENST00000372755 DAPL1A0PJW8 107 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 FAM149AA5PLN7 773 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 GNAZP19086 355 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 BNIP1Q12981 228 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 HNRNPDQ14103 355 aaKnown RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 CRTC2Q53ET0 693 aaPredicted RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 TATDN1Q6P1N9 297 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 SYVN1Q86TM6 617 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms