RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TRIT1Q9H3H1 467 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 NMUR1Q9HB89 426 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 A0A0J9YYE9 177 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 PRAMEF1O95521 474 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 ECDO95905 644 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TSPAN8P19075 237 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 PHC1P78364 1004 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 ALG11Q2TAA5 492 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CARD16Q5EG05 197 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 FAR1Q8WVX9 515 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF516Q92618 1163 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 SIN3BO75182 1162 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 AP2A1O95782 977 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 SOD2P04179 222 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 NFE2L1Q14494 772 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 NCCRP1Q6ZVX7 275 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 PRDM8Q9NQV8 689 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 NOCTQ9UK39 431 aaKnown RBP13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 A0A0X1KG70 313 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 SLC31A1O15431 190 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 MYL9P24844 172 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 MPSTP25325 297 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 DGKEP52429 567 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 RFTN1Q14699 578 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 GFOD2Q3B7J2 385 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 C4orf46Q504U0 113 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 R3HCC1LQ7Z5L2 792 aaKnown RBP13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 THAP5Q7Z6K1 395 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZBTB46Q86UZ6 589 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 SLC22A17Q8WUG5 538 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 RHOJQ9H4E5 214 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 FANCFQ9NPI8 374 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 SAGE2PA6NJ88 616 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 COL6A2P12110 1019 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 HECTD2Q5U5R9 776 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 FAM20CQ8IXL6 584 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 TEX47Q8TBZ9 253 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 IL12RB2Q99665 862 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 GSDMCQ9BYG8 508 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 PTTG2Q9NZH5 202 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 IL36AQ9UHA7 158 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 RGPD2P0DJD1 1756 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 RAB19A4D1S5 217 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 HSPA12AO43301 675 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 CHRNB2P17787 502 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 HTRA4P83105 476 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 CPSF6Q16630 551 aaKnown RBP eCLIP13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 NDUFA9Q16795 377 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 BICRALQ6AI39 1079 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 MAMDC4Q6UXC1 1216 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 PIGWQ7Z7B1 504 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 CNTD1Q8N815 330 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 TBC1D15Q8TC07 691 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 RUVBL1Q9Y265 456 aaKnown RBP13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 POLR1DQ9Y2S0 133 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 ENPP3O14638 875 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 TBX18O95935 607 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 ECT2LQ008S8 904 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 ATXN7L2Q5T6C5 722 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 LIN54Q6MZP7 749 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 GPR180Q86V85 440 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 MAFIPQ8WZ33 124 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 DPEP2Q9H4A9 486 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 IL23AQ9NPF7 189 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 PCDHGA4Q9Y5G9 962 aa13.13□□□□□ -0.31
RAPGEF1-201ENST00000372189 NPIPA5A0A0B4J1W7 369 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 IRGMA1A4Y4 181 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 PPIBP23284 216 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 PTP4A2Q12974 167 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 MED22Q15528 200 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 GPAT3Q53EU6 434 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 TDRPQ86YL5 185 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 POMGNT2Q8NAT1 580 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 BADQ92934 168 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 HAVCR1Q96D42 359 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 CIB1Q99828 191 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 PPP1R14DQ9NXH3 145 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 SAMD4AQ9UPU9 718 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 COQ4Q9Y3A0 265 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 M0R036 132 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 CD48P09326 243 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 GATMP50440 423 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 CCNIQ14094 377 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 USP51Q70EK9 711 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 APTXQ7Z2E3 356 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 CMC1Q7Z7K0 106 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 CFAP206Q8IYR0 622 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF567Q8N184 647 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 CRYBG2Q8N1P7 616 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 OR8K3Q8NH51 312 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 TDRD1Q9BXT4 1180 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 SGK2Q9HBY8 427 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 DNAJB4Q9UDY4 337 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF223Q9UK11 482 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms