RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.99■□□□□ 0.315e-7■■■■■ 35.3
UBE3D-203ENST00000369747 SPATA16Q9BXB7 569 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 BTBD1Q9H0C5 482 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 SARS2Q9NP81 518 aaKnown RBP16.99■□□□□ 0.31
UBE3D-203ENST00000369747 MID1IP1Q9NPA3 183 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 PLXNA2O75051 1894 aa16.99■□□□□ 0.31
UBE3D-203ENST00000369747 A0A1W2PQU0 124 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 TMEM221A6NGB7 291 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 M0R296 226 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 APBB3O95704 486 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 PAK4O96013 591 aaPredicted RBP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 MAT2AP31153 395 aaKnown RBP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 GCKP35557 465 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 SLC34A1Q06495 639 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 FGL2Q14314 439 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 TMEM259Q4ZIN3 620 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 FBXO48Q5FWF7 155 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 LARP4Q71RC2 724 aaKnown RBP eCLIP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 SNX20Q7Z614 316 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 TRPC4APQ8TEL6 797 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 AP2M1Q96CW1 435 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 RCN3Q96D15 328 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 C3orf30Q96M34 536 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 STOML1Q9UBI4 398 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 TMPRSS11EQ9UL52 423 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 PCDHB1Q9Y5F3 818 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 DNAJC15Q9Y5T4 150 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 TRBV5-4A0A0C4DH59 114 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 FADS2P1A8MWK0 482 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 K7ESF4 209 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 UBDO15205 165 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 RNGTTO60942 597 aaKnown RBP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 RPS17P08708 135 aaKnown RBP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 RPS3P23396 243 aaKnown RBP eCLIP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 ERFP50548 548 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 HK3P52790 923 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 MTTPP55157 894 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 FOXA1P55317 472 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 SESN3P58005 492 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 DCDC1P59894 354 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 RPS21P63220 83 aaKnown RBP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 CLCQ05315 142 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 SFSWAPQ12872 951 aaKnown RBP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 CCDC6Q16204 474 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 ZDHHC20Q5W0Z9 365 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 KANK2Q63ZY3 851 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 UGT3A1Q6NUS8 523 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 CYP2U1Q7Z449 544 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 DSELQ8IZU8 1212 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 FBXW8Q8N3Y1 598 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 EFCAB3Q8N7B9 438 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 KYQ8NBH2 561 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 NRG4Q8WWG1 115 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 NUS1Q96E22 293 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 C19orf60Q96EN9 201 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 TOE1Q96GM8 510 aaKnown RBP16.98■□□□□ 0.31
UBE3D-203ENST00000369747 BOCQ9BWV1 1114 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 C1QTNF3Q9BXJ4 246 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 DHRS7Q9Y394 339 aa16.98■□□□□ 0.31
UBE3D-203ENST00000369747 FRYLO94915 3013 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 A0A1B0GTL3 188 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 NCF1BA6NI72 391 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-203ENST00000369747 NCF1CA8MVU1 366 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-203ENST00000369747 STX16-NPEPL1H3BU86 382 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 STX16O14662 325 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 AZIN1O14977 448 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 IGLV3-19P01714 112 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 NCF1P14598 390 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-203ENST00000369747 PTPN5P54829 565 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 SQLEQ14534 574 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 TLDC1Q6P9B6 456 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 TSSK4Q6SA08 328 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 HPS6Q86YV9 775 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 NRSN1Q8IZ57 195 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 CAMKK1Q8N5S9 505 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 NAT14Q8WUY8 206 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 PREBQ9HCU5 417 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 SPATA6Q9NWH7 488 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-203ENST00000369747 MCM8Q9UJA3 840 aa16.97■□□□□ 0.31
UBE3D-203ENST00000369747 AGAP14A8MT82 685 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 SOD1P00441 154 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 ZNF7P17097 686 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-203ENST00000369747 ITGALP20701 1170 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 ACRV1P26436 265 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 AGTR2P50052 363 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 LCP2Q13094 533 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 PTK2BQ14289 1009 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 ZNF284Q2VY69 593 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 ANKS6Q68DC2 871 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 C16orf89Q6UX73 402 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 GK5Q6ZS86 529 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 PLA2G15Q8NCC3 412 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 ZNF483Q8TF39 744 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-203ENST00000369747 PDLIM5Q96HC4 596 aaKnown RBP16.96■□□□□ 0.31
UBE3D-203ENST00000369747 KCNA7Q96RP8 456 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 C1QTNF2Q9BXJ5 285 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 CLPBQ9H078 707 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 SEMA4BQ9NPR2 832 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-203ENST00000369747 NFKBIL1Q9UBC1 381 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-203ENST00000369747 POMPQ9Y244 141 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms