RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SPARCP09486 303 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 SYN1P17600 705 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 RPL9P32969 192 aaKnown RBP10.27□□□□□ -0.77
PRDM1-201ENST00000369089 BTN3A2P78410 334 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 SURF1Q15526 300 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 GPR19Q15760 415 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 RHBDF2Q6PJF5 856 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 SCARA5Q6ZMJ2 495 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 LRP10Q7Z4F1 713 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 ZNF527Q8NB42 609 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 FAM167AQ96KS9 214 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 C1QTNF7Q9BXJ2 289 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 MROH8Q9H579 483 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 FAM86C1Q9NVL1 165 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 C14orf105Q9NVL8 296 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 TAS2R7Q9NYW3 318 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 TRPS1Q9UHF7 1281 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 LRFN2Q9ULH4 789 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 PCDHB3Q9Y5E6 796 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 A0A1B0GVI7 797 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 GSAPA4D1B5 854 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 SUPT3HB4E1H0 165 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 NR2F6P10588 404 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 TSPAN8P19075 237 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 ATP5F1P24539 256 aaPredicted RBP10.27□□□□□ -0.77
PRDM1-201ENST00000369089 MAP2K4P45985 399 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 AFF1P51825 1210 aaKnown RBP10.27□□□□□ -0.77
PRDM1-201ENST00000369089 PSMD5Q16401 504 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 ARL13AQ5H913 290 aaPredicted RBP10.27□□□□□ -0.77
PRDM1-201ENST00000369089 GLB1L3Q8NCI6 653 aaPredicted RBP10.27□□□□□ -0.77
PRDM1-201ENST00000369089 MED10Q9BTT4 135 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 TRIM62Q9BVG3 475 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 RUSC1Q9BVN2 902 aa10.27□□□□□ -0.77
PRDM1-201ENST00000369089 FXYD6-FXYD2A0A087WZ82 144 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 C3orf70A6NLC5 250 aaPredicted RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 B4GALT4O60513 344 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 C1QBP02746 253 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 ITGB1P05556 798 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 HTR3AP46098 478 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 C2orf80Q0P641 193 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 PWP1Q13610 501 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 CSHL1Q14406 222 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 KANK2Q63ZY3 851 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 DEFB132Q7Z7B7 95 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 SIAH1Q8IUQ4 282 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 PHF21BQ96EK2 531 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 ZBED3Q96IU2 234 aaPredicted RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 FXYD6Q9H0Q3 95 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 CASS4Q9NQ75 786 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 REV1Q9UBZ9 1251 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 VPS28Q9UK41 221 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 ANKRD26Q9UPS8 1709 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 MAFO75444 373 aaPredicted RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 SEC14L2O76054 403 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 SOX30O94993 753 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 GLAP06280 429 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 RPL10P27635 214 aaKnown RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 GSTM5P46439 218 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 VEGFCP49767 419 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 AANATQ16613 207 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 PRAMEF18Q5VWM3 479 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 C3P1Q6ZMU1 363 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 CDH26Q8IXH8 852 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 SVBPQ8N300 66 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 CPA6Q8N4T0 437 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 OR6S1Q8NH40 331 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 SLC13A3Q8WWT9 602 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 NKD2Q969F2 451 aaPredicted RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 TMEM80Q96HE8 168 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 FICDQ9BVA6 458 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 ARNT2Q9HBZ2 717 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 ZBTB26Q9HCK0 441 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 ZNF302Q9NR11 478 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 UBP1Q9NZI7 540 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 NDRG3Q9UGV2 375 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 RNF112Q9ULX5 631 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 ZNF536O15090 1300 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 IRS2Q9Y4H2 1338 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 KIF1AQ12756 1690 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 CCNB2O95067 398 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 UGT8Q16880 541 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 NIPA1Q7RTP0 329 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 TSPAN33Q86UF1 283 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 SPATA6LQ8N4H0 392 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 GRIN3AQ8TCU5 1115 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 ACER1Q8TDN7 264 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 C7orf50Q9BRJ6 194 aaKnown RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 GATA5Q9BWX5 397 aaPredicted RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 RPF1Q9H9Y2 349 aaKnown RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 MYOZ2Q9NPC6 264 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 TOPORSQ9NS56 1045 aaPredicted RBP10.26□□□□□ -0.77
PRDM1-201ENST00000369089 NLKQ9UBE8 527 aa10.26□□□□□ -0.77
PRDM1-201ENST00000369089 SULT1C2O00338 296 aa10.25□□□□□ -0.77
PRDM1-201ENST00000369089 ZNF35P13682 527 aa10.25□□□□□ -0.77
PRDM1-201ENST00000369089 NCK1P16333 377 aa10.25□□□□□ -0.77
PRDM1-201ENST00000369089 CHRNB2P17787 502 aa10.25□□□□□ -0.77
PRDM1-201ENST00000369089 MAGEA12P43365 314 aa10.25□□□□□ -0.77
PRDM1-201ENST00000369089 NR2C2P49116 596 aa10.25□□□□□ -0.77
PRDM1-201ENST00000369089 CBLBQ13191 982 aa10.25□□□□□ -0.77
PRDM1-201ENST00000369089 EXOC3L2Q2M3D2 409 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms