RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CA5BQ9Y2D0 317 aa23.36■■□□□ 1.33
SNX3-203ENST00000368979 SIT1Q9Y3P8 196 aa23.36■■□□□ 1.33
SNX3-203ENST00000368979 TNPO3Q9Y5L0 923 aaKnown RBP23.36■■□□□ 1.33
SNX3-203ENST00000368979 KLHL33A6NCF5 533 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 E2F3O00716 465 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 UBFD1O14562 309 aaKnown RBP23.35■■□□□ 1.33
SNX3-203ENST00000368979 TAPBPO15533 448 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 AQP5P55064 265 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 CDH13P55290 713 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 ZXDAP98168 799 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 CLCQ05315 142 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 ABRQ12979 859 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 RPA4Q13156 261 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 CAMKK1Q8N5S9 505 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 AGR3Q8TD06 166 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 ESAMQ96AP7 390 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 EGFL8Q99944 293 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 TMEM79Q9BSE2 394 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 GPR174Q9BXC1 333 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 TRIM54Q9BYV2 358 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 EIF2B4Q9UI10 523 aaKnown RBP23.35■■□□□ 1.33
SNX3-203ENST00000368979 HS3ST3A1Q9Y663 406 aa23.35■■□□□ 1.33
SNX3-203ENST00000368979 H0Y8X5 98 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 FSBPO95073 299 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 ANXA5P08758 320 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 AP1S2P56377 157 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 NFATC4Q14934 902 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 C18orf21Q32NC0 220 aaPredicted RBP23.34■■□□□ 1.33
SNX3-203ENST00000368979 SPATS2Q86XZ4 545 aaKnown RBP23.34■■□□□ 1.33
SNX3-203ENST00000368979 FRMD1Q8N878 549 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 RLN3Q8WXF3 142 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 IER2Q9BTL4 223 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 OR52A5Q9H2C5 316 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 TM7SF3Q9NS93 570 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 ARL15Q9NXU5 204 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 ZNHIT2Q9UHR6 403 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 DMTF1Q9Y222 760 aa23.34■■□□□ 1.33
SNX3-203ENST00000368979 ARHGEF33A8MVX0 844 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 MATN2O00339 956 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 DCNP07585 359 aaKnown RBP23.33■■□□□ 1.33
SNX3-203ENST00000368979 HIST1H2AGP0C0S8 130 aaPredicted RBP23.33■■□□□ 1.33
SNX3-203ENST00000368979 TSPAN8P19075 237 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 HIST1H2ADP20671 130 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 DMPKQ09013 629 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 LCP2Q13094 533 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.33■■□□□ 1.33
SNX3-203ENST00000368979 SH2D4BQ5SQS7 431 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 MBOAT1Q6ZNC8 495 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 MCOLN3Q8TDD5 553 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 BIRC7Q96CA5 298 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 HIST1H2AHQ96KK5 128 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 FOPNLQ96NB1 174 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 HIST1H2AJQ99878 128 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 TIMM29Q9BSF4 260 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 H2AFJQ9BTM1 129 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 STN1Q9H668 368 aaKnown RBP23.33■■□□□ 1.33
SNX3-203ENST00000368979 ZBTB26Q9HCK0 441 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 FGF22Q9HCT0 170 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 TNFRSF12AQ9NP84 129 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 DNAJC28Q9NX36 388 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 WWOXQ9NZC7 414 aa23.33■■□□□ 1.33
SNX3-203ENST00000368979 SLCO1B7G3V0H7 640 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 PRAMEF26H0Y7S4 382 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 TOR1BO14657 336 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 CATP04040 527 aaKnown RBP23.33■■□□□ 1.32
SNX3-203ENST00000368979 ACADLP28330 430 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 NUDT1P36639 197 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 YPEL5P62699 121 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 PYCR3Q53H96 274 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 METTL2BQ6P1Q9 378 aaKnown RBP23.33■■□□□ 1.32
SNX3-203ENST00000368979 KIRREL3Q8IZU9 778 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 TCAIMQ8N3R3 496 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 FAM160A2Q8N612 972 aaPredicted RBP23.33■■□□□ 1.32
SNX3-203ENST00000368979 FBXO15Q8NCQ5 510 aaPredicted RBP23.33■■□□□ 1.32
SNX3-203ENST00000368979 TRPC4APQ8TEL6 797 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 WWP1Q9H0M0 922 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 SUFUQ9UMX1 484 aa23.33■■□□□ 1.32
SNX3-203ENST00000368979 PPP6CO00743 305 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 GGT5P36269 586 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 HSPA7P48741 367 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 PXNP49023 591 aaPredicted RBP23.32■■□□□ 1.32
SNX3-203ENST00000368979 SH3BP2P78314 561 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 TPRG1LQ5T0D9 272 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 METRNLQ641Q3 311 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 ABI3BPQ7Z7G0 1075 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 GALNT13Q8IUC8 556 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 OR56A4Q8NGH8 313 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 CFAP61Q8NHU2 1237 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 AGAP11Q8TF27 550 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 WDR92Q96MX6 357 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 CD244Q9BZW8 370 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 SEMA4BQ9NPR2 832 aaPredicted RBP23.32■■□□□ 1.32
SNX3-203ENST00000368979 MRPL40Q9NQ50 206 aaKnown RBP23.32■■□□□ 1.32
SNX3-203ENST00000368979 VTI1BQ9UEU0 232 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.32■■□□□ 1.32
SNX3-203ENST00000368979 CUL9Q8IWT3 2517 aa23.32■■□□□ 1.32
SNX3-203ENST00000368979 PRSS38A1L453 326 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 PABPN1LA6NDY0 278 aaKnown RBP23.31■■□□□ 1.32
SNX3-203ENST00000368979 PRR19A6NJB7 356 aa23.31■■□□□ 1.32
SNX3-203ENST00000368979 TMEM233B4DJY2 109 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms