RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SHOC2Q9UQ13 582 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 HS3ST3B1Q9Y662 390 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 HCFC1P51610 2035 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 TRAV17A0A0B4J275 112 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 GSAPA4D1B5 854 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 MATN2O00339 956 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 HCRTR1O43613 425 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 POP7O75817 140 aaKnown RBP14.14□□□□□ -0.15
VAMP4-202ENST00000367740 OR2B3O76000 313 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 WISP2O76076 250 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 CES1P23141 567 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 PRDX3P30048 256 aaKnown RBP14.14□□□□□ -0.15
VAMP4-202ENST00000367740 CTSCP53634 463 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 CASP6P55212 293 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 DPYSL2Q16555 572 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 LONRF1Q17RB8 773 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 DEFB110Q30KQ9 67 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 ATP13A5Q4VNC0 1218 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 TAOK1Q7L7X3 1001 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 POLNQ7Z5Q5 900 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 ANKRD20A12PQ8NF67 263 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 OR4E2Q8NGC2 313 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 CSPG4P5Q96PW8 444 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 WWP1Q9H0M0 922 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 AP1M2Q9Y6Q5 423 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 CSPG4Q6UVK1 2322 aa14.14□□□□□ -0.15
VAMP4-202ENST00000367740 STAB1Q9NY15 2570 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 HLA-DQB2P05538 268 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 CTSBP07858 339 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 MMP2P08253 660 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 PIRTP0C851 137 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 SERPINB6P35237 376 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 ARL4AP40617 200 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 TUBB8Q3ZCM7 444 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 METRNLQ641Q3 311 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 TMC3Q7Z5M5 1100 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 MCOLN2Q8IZK6 566 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 RASGEF1AQ8N9B8 481 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 CPLX3Q8WVH0 158 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 NRTNQ99748 197 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 TRIM7Q9C029 511 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 SPRTNQ9H040 489 aaPredicted RBP14.13□□□□□ -0.15
VAMP4-202ENST00000367740 FAM60AQ9NP50 221 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 RAD18Q9NS91 495 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 SEPT11Q9NVA2 429 aaKnown RBP14.13□□□□□ -0.15
VAMP4-202ENST00000367740 PLA2G3Q9NZ20 509 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 MEMO1Q9Y316 297 aa14.13□□□□□ -0.15
VAMP4-202ENST00000367740 FBN1P35555 2871 aaKnown RBP14.12□□□□□ -0.15
VAMP4-202ENST00000367740 COL6A5A8TX70 2615 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 FN1P02751 2386 aaKnown RBP14.12□□□□□ -0.15
VAMP4-202ENST00000367740 SNRNP200O75643 2136 aaKnown RBP14.12□□□□□ -0.15
VAMP4-202ENST00000367740 BTN3A1O00481 513 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 MAP3K7O43318 606 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 CRYABP02511 175 aaKnown RBP14.12□□□□□ -0.15
VAMP4-202ENST00000367740 IGFBP2P18065 325 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 ITGAXP20702 1163 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 IL1R2P27930 398 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 PBLDP30039 288 aaPredicted RBP14.12□□□□□ -0.15
VAMP4-202ENST00000367740 GABRA4P48169 554 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 ZNF165P49910 485 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 MAMLD1Q13495 774 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 HSP90AA4PQ58FG1 418 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 GDAP1Q8TB36 358 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 TTC25Q96NG3 672 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 SPSB2Q99619 263 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 MESP1Q9BRJ9 268 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 DEF6Q9H4E7 631 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 GPAMQ9HCL2 828 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 NLRC4Q9NPP4 1024 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 RBM22Q9NW64 420 aaKnown RBP eCLIP14.12□□□□□ -0.15
VAMP4-202ENST00000367740 AMACRQ9UHK6 382 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 ZNF711Q9Y462 761 aa14.12□□□□□ -0.15
VAMP4-202ENST00000367740 HRNRQ86YZ3 2850 aaPredicted RBP14.12□□□□□ -0.15
VAMP4-202ENST00000367740 RTTNQ86VV8 2226 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 DYTNA2CJ06 578 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 OR2AG2A6NM03 316 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 BTN3A3O00478 584 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 PES1O00541 588 aaKnown RBP14.11□□□□□ -0.15
VAMP4-202ENST00000367740 EPHB6O15197 1021 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 MATN3O15232 486 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 ZSCAN9O15535 394 aaPredicted RBP14.11□□□□□ -0.15
VAMP4-202ENST00000367740 MFSD11O43934 449 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 RNF8O76064 485 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 RASAL1O95294 804 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 FOSL1P15407 271 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 SOX11P35716 441 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 CD86P42081 329 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 KLK7P49862 253 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 POLR2FP61218 127 aaKnown RBP14.11□□□□□ -0.15
VAMP4-202ENST00000367740 TMPRSS15P98073 1019 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 AKAP6Q13023 2319 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 TMEM200AQ86VY9 491 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 PRIMA1Q86XR5 153 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 FAM20CQ8IXL6 584 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 ZNF655Q8N720 491 aaPredicted RBP14.11□□□□□ -0.15
VAMP4-202ENST00000367740 OR11G2Q8NGC1 345 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 DNAJB8Q8NHS0 232 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 N4BP2L2Q92802 583 aaPredicted RBP14.11□□□□□ -0.15
VAMP4-202ENST00000367740 RMDN2Q96LZ7 410 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 TRIB3Q96RU7 358 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms