RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 POP7O75817 140 aaKnown RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 FAM155BO75949 473 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 CDK14O94921 469 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 HLA-DQB2P05538 268 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 CALB1P05937 261 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 HSP90AA1P07900 732 aaKnown RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 KLK2P20151 261 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 PSMA2P25787 234 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 SOX5P35711 763 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 GABRA4P48169 554 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMPRSS15P98073 1019 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 DMPKQ09013 629 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 MAMLD1Q13495 774 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZIC1Q15915 447 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 ASIC2Q16515 512 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMTC4Q5T4D3 741 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 AGAP7PQ5VUJ5 663 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 FCRL6Q6DN72 434 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 RPUSD3Q6P087 351 aaKnown RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 KLHL35Q6PF15 583 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 XKRXQ6PP77 449 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 KIRREL2Q6UWL6 708 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMEM207Q6UWW9 146 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 Q71RC1 249 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 POLNQ7Z5Q5 900 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 OOSP2Q86WS3 158 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 PRIMA1Q86XR5 153 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 TRAPPC5Q8IUR0 188 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 MCOLN2Q8IZK6 566 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 ATPAF2Q8N5M1 289 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 TRAM1L1Q8N609 369 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 LILRA3Q8N6C8 439 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 RASGEF1AQ8N9B8 481 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 OR4E2Q8NGC2 313 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 MAML1Q92585 1016 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 PTERQ96BW5 349 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 MAGEB10Q96LZ2 347 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 AGAP3Q96P47 875 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 AGAP4Q96P64 663 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 CSPG4P5Q96PW8 444 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 SMR3AQ99954 134 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 DPH2Q9BQC3 489 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 PITPNM3Q9BZ71 974 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 WWP1Q9H0M0 922 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 CXXC4Q9H2H0 198 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 IMP3Q9NV31 184 aaKnown RBP8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 SHOC2Q9UQ13 582 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 PADI2Q9Y2J8 665 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 HS3ST3B1Q9Y662 390 aa8.2□□□□□ -1.1
HMGB1P39-201ENST00000366304 VPS13CQ709C8 3753 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMEM200CA6NKL6 621 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 ANKRD66B4E2M5 251 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 EIF3CLB5ME19 914 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 E7EQ34 232 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 CLDN14O95500 239 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 F10P00742 488 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 SLC4A1P02730 911 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 MSL3P1P0C860 447 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 AGXTP21549 392 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 CDH3P22223 829 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 PRDX3P30048 256 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 DNAJA1P31689 397 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 HALP42357 657 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 IST1P53990 364 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 CDH6P55285 790 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 DCDC1P59894 354 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 RPL26P61254 145 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 ADCY2Q08462 1091 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMEM115Q12893 351 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 FOXD4Q12950 439 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 MFAP5Q13361 173 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 CYP2A13Q16696 494 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 DEFB110Q30KQ9 67 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 ATP13A5Q4VNC0 1218 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMCO3Q6UWJ1 677 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 MEX3BQ6ZN04 569 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMC3Q7Z5M5 1100 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 FAM20CQ8IXL6 584 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 NDUFAF2Q8N183 169 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 CARFQ8N187 725 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 BEND7Q8N7W2 519 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 CHTF18Q8WVB6 975 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 HDAC11Q96DB2 347 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 TRIB3Q96RU7 358 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 EIF3CQ99613 913 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 TUBGCP2Q9BSJ2 902 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 NDC1Q9BTX1 674 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZSCAN5AQ9BUG6 496 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 POLR1EQ9GZS1 481 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 KIR3DX1Q9H7L2 352 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 FANCEQ9HB96 536 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 CBX8Q9HC52 389 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 NLRC4Q9NPP4 1024 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 C1GALT1Q9NS00 363 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 NFKBIL1Q9UBC1 381 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 TNFRSF10DQ9UBN6 386 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 HOOK1Q9UJC3 728 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 DNPEPQ9ULA0 475 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 RPL26L1Q9UNX3 145 aaKnown RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 SPO11Q9Y5K1 396 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms