RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 KLHL25Q9H0H3 589 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 SERTAD3Q9UJW9 196 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 C2orf81A6NN90 581 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 BTN3A3O00478 584 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 BTN3A1O00481 513 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 MSL3P1P0C860 447 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 TAF1AQ15573 450 aaPredicted RBP20.48■□□□□ 0.87
CD47-202ENST00000361309 PLEKHN1Q494U1 663 aaPredicted RBP20.48■□□□□ 0.87
CD47-202ENST00000361309 ZNF787Q6DD87 383 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 RAB43Q86YS6 212 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 HM13Q8TCT9 377 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 DCUN1D1Q96GG9 259 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 SGSM3Q96HU1 749 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 QKIQ96PU8 341 aaKnown RBP eCLIP20.48■□□□□ 0.872e-6■■■■■ 80.9
CD47-202ENST00000361309 ZNHIT6Q9NWK9 470 aaKnown RBP20.48■□□□□ 0.87
CD47-202ENST00000361309 CRLS1Q9UJA2 301 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 TRHDEQ9UKU6 1024 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 DOCK10Q96BY6 2186 aa20.48■□□□□ 0.87
CD47-202ENST00000361309 NUP210LQ5VU65 1888 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 CCDC66A2RUB6 948 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 C9J4A7 227 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 E7EQ34 232 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 MAP3K7O43318 606 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 ZNF749O43361 778 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 RALBP11234 206 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 PVRP15151 417 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 OTX2P32243 289 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 PRLHRP49683 370 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 XIAPP98170 497 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 NR6A1Q15406 480 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 KYNUQ16719 465 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 MAMDC2Q7Z304 686 aaPredicted RBP20.47■□□□□ 0.87
CD47-202ENST00000361309 SNRNP40Q96DI7 357 aaKnown RBP20.47■□□□□ 0.87
CD47-202ENST00000361309 TCTN2Q96GX1 697 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 TRAPPC9Q96Q05 1148 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 GORASP1Q9BQQ3 440 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 ANP32EQ9BTT0 268 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 PITPNM3Q9BZ71 974 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 C5AR2Q9P296 337 aa20.47■□□□□ 0.87
CD47-202ENST00000361309 ERRFI1Q9UJM3 462 aaPredicted RBP20.47■□□□□ 0.87
CD47-202ENST00000361309 DIDO1Q9BTC0 2240 aaKnown RBP20.46■□□□□ 0.87
CD47-202ENST00000361309 AGAP14A8MT82 685 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 CLDN1O95832 211 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 AGXTP21549 392 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 GEMP55040 296 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 OLIG2Q13516 323 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 TFDP3Q5H9I0 405 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 VWA5B1Q5TIE3 1220 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 ZNF385CQ66K41 422 aaPredicted RBP20.46■□□□□ 0.87
CD47-202ENST00000361309 CDHR3Q6ZTQ4 885 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 PHC3Q8NDX5 983 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 OR13C4Q8NGS5 318 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 RBM41Q96IZ5 413 aaKnown RBP20.46■□□□□ 0.87
CD47-202ENST00000361309 CCDC42Q96M95 316 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 DPH2Q9BQC3 489 aaPredicted RBP20.46■□□□□ 0.87
CD47-202ENST00000361309 APOL2Q9BQE5 337 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 FAM96AQ9H5X1 160 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 C10orf88Q9H8K7 445 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 NHEJ1Q9H9Q4 299 aaPredicted RBP20.46■□□□□ 0.87
CD47-202ENST00000361309 PADI2Q9Y2J8 665 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 PCM1Q15154 2024 aa20.46■□□□□ 0.87
CD47-202ENST00000361309 hCG_1818297A0A087WSY0 165 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 C5orf60A6NFR6 353 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 WIPF3A6NGB9 483 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 HACD1B0YJ81 288 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 PSTPIP1O43586 416 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 KLF7O75840 302 aaPredicted RBP20.45■□□□□ 0.86
CD47-202ENST00000361309 CBX6O95503 412 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 TPM3P06753 285 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 ATP1B2P14415 290 aaPredicted RBP20.45■□□□□ 0.86
CD47-202ENST00000361309 TMPRSS15P98073 1019 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 RANBP10Q6VN20 620 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 IQCKQ8N0W5 287 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 NXPE1Q8N323 547 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 CISD2Q8N5K1 135 aaKnown RBP20.45■□□□□ 0.86
CD47-202ENST00000361309 OR52E1Q8NGJ3 308 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 GBA3Q9H227 469 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 OR52A5Q9H2C5 316 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 TFB2MQ9H5Q4 396 aaKnown RBP20.45■□□□□ 0.86
CD47-202ENST00000361309 XKR8Q9H6D3 395 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 COG4Q9H9E3 785 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 ABHD10Q9NUJ1 306 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 ASF1BQ9NVP2 202 aa20.45■□□□□ 0.86
CD47-202ENST00000361309 CNTRLQ7Z7A1 2325 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 C17orf113A0A1B0GUU1 675 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 C2orf74A8MZ97 194 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 LDB2O43679 373 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 ANXA9O76027 345 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 LDLRP01130 860 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 HBQ1P09105 142 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 RBL1P28749 1068 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 TRIM14Q14142 442 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 TCEAL1Q15170 157 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 MLIPQ5VWP3 458 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 MRGPREQ86SM8 312 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 AMIGO1Q86WK6 493 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 ADGRF3Q8IZF5 1079 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 ULK4Q96C45 1275 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 COPS8Q99627 209 aa20.44■□□□□ 0.86
CD47-202ENST00000361309 DHRS4Q9BTZ2 278 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms