RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RRAGCQ9HB90 399 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SEMA3GQ9NS98 782 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 DNAJC11Q9NVH1 559 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 KCTD5Q9NXV2 234 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 MOCS1Q9NZB8 636 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ECI2O75521 394 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ETV4P43268 484 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 RELAQ04206 551 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 IFI44LQ53G44 452 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ZNF678Q5SXM1 525 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 PYURFQ96I23 114 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 BTN2A3PQ96KV6 586 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 EBPLQ9BY08 206 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 MMP27Q9H306 513 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 GULP1Q9UBP9 304 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ZNF487B1APH4 448 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 PFKPQ01813 784 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 PAFAH1B3Q15102 231 aaKnown RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 LIN54Q6MZP7 749 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 FBXL19Q6PCT2 694 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 CHST15Q7LFX5 561 aaPredicted RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 BRSK1Q8TDC3 778 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 PPP1R13LQ8WUF5 828 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 UFD1Q92890 307 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 NTAN1Q96AB6 310 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 MYO19Q96H55 970 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SLC30A2Q9BRI3 323 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SPATA7Q9P0W8 599 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 CLEC4AQ9UMR7 237 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 MAP4K5Q9Y4K4 846 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 FAM172BPA6NC97 362 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 RPN2P04844 631 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 SLC2A2P11168 524 aaPredicted RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 DARSP14868 501 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 TNNI3P19429 210 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 CD72P21854 359 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 NFATC3Q12968 1075 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 TEAD4Q15561 434 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 WSCD2Q2TBF2 565 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 OR2T5Q6IEZ7 315 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 SCML4Q8N228 414 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 OR2T29Q8NH02 315 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 NPLQ9BXD5 320 aaPredicted RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 FTHL17Q9BXU8 183 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 ANKRD60Q9BZ19 345 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 ZNF232Q9UNY5 417 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 BAZ2AQ9UIF9 1905 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 BTBD19C9JJ37 291 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 BHMG1C9JSJ3 638 aaPredicted RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 H3BMQ9 156 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 NDUFB5O43674 189 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 TBL1XO60907 577 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 CYP3A5P20815 502 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 GMFBP60983 142 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 MON1AQ86VX9 555 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 COLGALT2Q8IYK4 626 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 ASCC1Q8N9N2 400 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 TXNDC5Q8NBS9 432 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 COG8Q96MW5 612 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 SYT11Q9BT88 431 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 FZD8Q9H461 694 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 C12orf4Q9NQ89 552 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 ADARB2Q9NS39 739 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 NKIRAS2Q9NYR9 191 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 MALT1Q9UDY8 824 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 DDNO94850 711 aaPredicted RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 VARSP26640 1264 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 RBM20Q5T481 1227 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 TAPT1Q6NXT6 567 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 TMEM192Q8IY95 271 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 CPNE9Q8IYJ1 553 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 ERMAPQ96PL5 475 aaPredicted RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 NENFQ9UMX5 172 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 CDC14AQ9UNH5 594 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 RAI2Q9Y5P3 530 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 HOXA2O43364 376 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 HLA-DQB2P05538 268 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 HCAR3P49019 387 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 TSTQ16762 297 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 CCDC157Q569K6 752 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 NAPRTQ6XQN6 538 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 HACD2Q6Y1H2 254 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 FAM220AQ7Z4H9 259 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 CCDC36Q8IYA8 594 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 OR10G2Q8NGC3 310 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 DHRS4Q9BTZ2 278 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 TM6SF2Q9BZW4 377 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 ZNF701M0R085 212 aaPredicted RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 GADD45GO95257 159 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 PRKACGP22612 351 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 HOXD10P28358 340 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 PIGFQ07326 219 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 SUZ12Q15022 739 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 CHMP1BQ7LBR1 199 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 PIM3Q86V86 326 aa13.73□□□□□ -0.21
SMC5-201ENST00000361138 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 MRM3Q9HC36 420 aaKnown RBP13.73□□□□□ -0.21
SMC5-201ENST00000361138 RAD18Q9NS91 495 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms