RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TRMOQ9BU70 441 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 CPNE7Q9UBL6 633 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 GPR52Q9Y2T5 361 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 MTF2Q9Y483 593 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 OR51F1A6NGY5 319 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CAPN8A6NHC0 703 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CCL22O00626 93 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MUSKO15146 869 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TRIM24O15164 1050 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CFLARO15519 480 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 GJB3O75712 270 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 EPOP01588 193 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ARSAP15289 507 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CD1DP15813 335 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 YWHAQP27348 245 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MAP2K6P52564 334 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PLK1P53350 603 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ILF2Q12905 390 aaKnown RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 POLD3Q15054 466 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PDK3Q15120 406 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 UGT3A2Q3SY77 523 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 UNC50Q53HI1 259 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 STEAP3Q658P3 488 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 RAP1GAP2Q684P5 730 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 C8orf82Q6P1X6 216 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF549Q6P9A3 640 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 LARP4Q71RC2 724 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MARVELD2Q8N4S9 558 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ASB15Q8WXK1 588 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PTERQ96BW5 349 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ASB9Q96DX5 294 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PHF21BQ96EK2 531 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MYEOVQ96EZ4 313 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 DCUN1D1Q96GG9 259 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 KLHL32Q96NJ5 620 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MRPL1Q9BYD6 325 aaKnown RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PDFQ9HBH1 243 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 OLA1Q9NTK5 396 aaKnown RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TMPRSS11EQ9UL52 423 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 DTNAQ9Y4J8 743 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 DGKBQ9Y6T7 804 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 VWA8A3KMH1 1905 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ENO4A6NNW6 628 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TRIM38O00635 465 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 UBDO15205 165 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PRAMEF11O60813 436 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 RAMP2O60895 175 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 VNN2O95498 520 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CKBP12277 381 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MAPKAPK2P49137 400 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 YBEYP58557 167 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PSME3P61289 254 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PRAMEP78395 509 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 IRX1P78414 480 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 STX5Q13190 355 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 C5orf22Q49AR2 442 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 NADSYN1Q6IA69 706 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PIM3Q86V86 326 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 RNF148Q8N7C7 305 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ATG16L2Q8NAA4 619 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ATAD1Q8NBU5 361 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 HHIPL1Q96JK4 782 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 FEM1CQ96JP0 617 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TBATAQ96M53 351 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ALG9Q9H6U8 611 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 GRHPRQ9UBQ7 328 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 RIMKLBQ9ULI2 386 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 E7ENX8 843 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PSMD12O00232 456 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CA12O43570 354 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TUSC2O75896 110 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 GOT2P00505 430 aaKnown RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 FGF4P08620 206 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 VSIG8P0DPA2 414 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 HLA-DPA1P20036 260 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ACVRL1P37023 503 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 OR1G1P47890 313 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ATP4BP51164 291 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 RAB1AP62820 205 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 HERVK_113P63132 956 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TAF10Q12962 218 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 SEMA3AQ14563 771 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MAPRE2Q15555 327 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF385CQ66K41 422 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 REP15Q6BDI9 236 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MILR1Q7Z6M3 343 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TOP1MTQ969P6 601 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TMA16Q96EY4 203 aaKnown RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 GBP5Q96PP8 586 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 GCNAQ96QF7 691 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 PKP2Q99959 881 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 SEMA3CQ99985 751 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 SORBS1Q9BX66 1292 aaKnown RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 ERVK-6Q9BXR3 956 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 WDR12Q9GZL7 423 aaKnown RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 POLR1EQ9GZS1 481 aaKnown RBP7.23□□□□□ -1.25
CLCN3-202ENST00000360642 MTG2Q9H4K7 406 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 POPDC3Q9HBV1 291 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 TRPC7Q9HCX4 862 aa7.23□□□□□ -1.25
CLCN3-202ENST00000360642 CD300AQ9UGN4 299 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms