RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 BNIP1Q12981 228 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 PLEKHS1Q5SXH7 462 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SH3PXD2AQ5TCZ1 1133 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 MZT2BQ6NZ67 158 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TMPRSS11AQ6ZMR5 421 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LDB1Q86U70 411 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 BPIFB6Q8NFQ5 453 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 NMD3Q96D46 503 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TWNKQ96RR1 684 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SLC29A3Q9BZD2 475 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 BTBD1Q9H0C5 482 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 XYLT2Q9H1B5 865 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CDH22Q9UJ99 828 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 NDRG2Q9UN36 371 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CFL2Q9Y281 166 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SNX10Q9Y5X0 201 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LCHNA4D1U4 455 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 GSRP00390 522 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF865P0CJ78 1059 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ITPKBP27987 946 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 RCVRNP35243 200 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 RPL5P46777 297 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 IDH3AP50213 366 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SEC13P55735 322 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 RPS14P62263 151 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SLC10A7Q0GE19 358 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 DCST1Q5T197 706 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 DEF8Q6ZN54 512 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 RNF44Q7L0R7 432 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 OSTM1Q86WC4 334 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 HID1Q8IV36 788 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LINC00471Q8N535 108 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 NETO2Q8NC67 525 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 HM13Q8TCT9 377 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TRIB2Q92519 343 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CMTM7Q96FZ5 175 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CAMK1GQ96NX5 476 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CDCA3Q99618 268 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 GPR22Q99680 433 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 KIFC1Q9BW19 673 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 GATA5Q9BWX5 397 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 DERL2Q9GZP9 239 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CERS4Q9HA82 394 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 S100A14Q9HCY8 104 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 RSL24D1Q9UHA3 163 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SESN1Q9Y6P5 492 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LAMB1P07942 1786 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LEFTY2O00292 366 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 KLF11O14901 512 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CAPGP40121 348 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 C1QTNF8P60827 252 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TCEAL5Q5H9L2 206 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 RNF19BQ6ZMZ0 732 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 NUDT13Q86X67 352 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 GKN2Q86XP6 184 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SLC38A4Q969I6 547 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CLPTM1LQ96KA5 538 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SLC2A13Q96QE2 648 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 NMUR2Q9GZQ4 415 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 MAGEE1Q9HCI5 957 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ZIM2Q9NZV7 527 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 GABRQQ9UN88 632 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 OAZ2O95190 189 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 RGS8P57771 180 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 REP15Q6BDI9 236 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 FAAH2Q6GMR7 532 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 C22orf39Q6P5X5 142 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ZDHHC24Q6UX98 284 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 OXR1Q8N573 874 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF781Q8N8C0 355 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ENKURQ8TC29 256 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ERLEC1Q96DZ1 483 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LMLNQ96KR4 655 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ATG10Q9H0Y0 220 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 FBXL12Q9NXK8 326 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 C9IYK1 514 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 XKRYO14609 159 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ADAMTS3O15072 1205 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ZMPSTE24O75844 475 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 PIAS1O75925 651 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 CD247P20963 164 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ALAS2P22557 587 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 FGFR3P22607 806 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 PROZP22891 400 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 SCAPQ12770 1279 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TRIM25Q14258 630 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 EIF4HQ15056 248 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ITPRIPL2Q3MIP1 535 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 TMEM164Q5U3C3 297 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 DCAF12L1Q5VU92 463 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 MRPL10Q7Z7H8 261 aaKnown RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 LIX1Q8N485 282 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF527Q8NB42 609 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 NR4A3Q92570 626 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 DNASE1L2Q92874 299 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 ANKHQ9HCJ1 492 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 NLE1Q9NVX2 485 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-202ENST00000360093 HCN3Q9P1Z3 774 aa4.78□□□□□ -1.64
SCN3A-202ENST00000360093 VPS29Q9UBQ0 182 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms