RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 UBAP1Q9NZ09 502 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 ZNF510Q9Y2H8 683 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 A0A1B0GTL3 188 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 DFNA5O60443 496 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 RECQL5O94762 991 aaPredicted RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 EPN2O95208 641 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 PRAMEF12O95522 483 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 PRLP01236 227 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 BPIP17213 487 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 CLCN4P51793 760 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 RPS14P62263 151 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 RFTN2Q52LD8 501 aaPredicted RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 CTSL3PQ5NE16 218 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 ERAP2Q6P179 960 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 DOK6Q6PKX4 331 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 TMEM26Q6ZUK4 368 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 RBM23Q86U06 439 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 ADHFE1Q8IWW8 467 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 C8orf59Q8N0T1 100 aaPredicted RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 SFRP1Q8N474 314 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 MINDY1Q8N5J2 469 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 SLC47A1Q96FL8 570 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 WRAP53Q9BUR4 548 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 KLF16Q9BXK1 252 aaPredicted RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 TUBB1Q9H4B7 451 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 CCM2LQ9NUG4 571 aaPredicted RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 DNAJC11Q9NVH1 559 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 SLC22A14Q9Y267 594 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 PENKP01210 267 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 MYCLP1P12525 358 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 CDH2P19022 906 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 MYLK3Q32MK0 819 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 CCSAPQ6IQ19 270 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 KLHDC10Q6PID8 442 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 DPY19L3Q6ZPD9 716 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 TPRG1Q6ZUI0 275 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 GALNT7Q86SF2 657 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 BPIFB6Q8NFQ5 453 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 ASZ1Q8WWH4 475 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 ACAT2Q9BWD1 397 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 TTLL2Q9BWV7 592 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 ZDHHC3Q9NYG2 299 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 B4GALT6Q9UBX8 382 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 RIMKLBQ9ULI2 386 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 SBF1O95248 1867 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 FAM155AB1AL88 458 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 G3V2T6 193 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 DENRO43583 198 aaKnown RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 NOBOXO60393 691 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 ELFN1P0C7U0 828 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 CYP4B1P13584 511 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 EMX2Q04743 252 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 CYP4F3Q08477 520 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 LAPTM5Q13571 262 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 CBX2Q14781 532 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 C16orf72Q14CZ0 275 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 HIST2H2ACQ16777 129 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 PTCHD3Q3KNS1 767 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 HIST2H2AA3Q6FI13 130 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 UGT2A3Q6UWM9 527 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 C11orf96Q7Z7L8 435 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 PHACTR4Q8IZ21 702 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 KRTCAP2Q8N6L1 136 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 SNRNP27Q8WVK2 155 aaKnown RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 MYLIPQ8WY64 445 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 PHF12Q96QT6 1004 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 FARSBQ9NSD9 589 aaKnown RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 TRMUO75648 421 aaKnown RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 UMPSP11172 480 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 OXTRP30559 389 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 KIR3DL1P43629 444 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 OCA2Q04671 838 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 PLA2G4EQ3MJ16 856 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 CNKSR3Q6P9H4 555 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 CHST15Q7LFX5 561 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 TMEM126BQ8IUX1 230 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 RAVER1Q8IY67 606 aaKnown RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 C2orf73Q8N5S3 287 aaPredicted RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 WFDC5Q8TCV5 224 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 ZUFSPQ96AP4 578 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 ITCHQ96J02 903 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 NSMCE3Q96MG7 304 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 HTATIP2Q9BUP3 242 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 CD244Q9BZW8 370 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 RHBDL2Q9NX52 303 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 MAP10Q9P2G4 905 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 TDRKHQ9Y2W6 561 aaKnown RBP10.97□□□□□ -0.65
SSU72-202ENST00000359060 DYRK1BQ9Y463 629 aa10.97□□□□□ -0.65
SSU72-202ENST00000359060 UPK3BL1B0FP48 263 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 UPK3BL2E5RIL1 263 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 IGLV3-27P01718 113 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 PGRP06401 933 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 PABPC1P11940 636 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 HMGA1P17096 107 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 CXorf57Q6NSI4 855 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 Q6ZVL8 140 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 GALNT5Q7Z7M9 940 aa10.96□□□□□ -0.65
SSU72-202ENST00000359060 CMTR2Q8IYT2 770 aaKnown RBP10.96□□□□□ -0.65
SSU72-202ENST00000359060 ZNF683Q8IZ20 524 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms