RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 C9orf64Q5T6V5 341 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 EGFLAMQ63HQ2 1017 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 BRAT1Q6PJG6 821 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 CERS6Q6ZMG9 384 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 VASH1Q7L8A9 365 aaPredicted RBP12.42□□□□□ -0.42
GGPS1-202ENST00000358966 TERB1Q8NA31 727 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 ARRDC3Q96B67 414 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 CCDC126Q96EE4 140 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 THTPAQ9BU02 230 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 EPB41L1Q9H4G0 881 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 MRGBPQ9NV56 204 aa12.42□□□□□ -0.42
GGPS1-202ENST00000358966 RBMX2Q9Y388 322 aaKnown RBP12.42□□□□□ -0.42
GGPS1-202ENST00000358966 GOLGA4Q13439 2230 aaKnown RBP12.42□□□□□ -0.42
GGPS1-202ENST00000358966 SH3PXD2BA1X283 911 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 HOXB8P17481 243 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-202ENST00000358966 SEC13P55735 322 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 NFKB2Q00653 900 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 ACOX1Q15067 660 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 ANKRD54Q6NXT1 300 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 FRA10AC1Q70Z53 315 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 STMN2Q93045 179 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 MCUR1Q96AQ8 359 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 TIFAQ96CG3 184 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 ECSITQ9BQ95 431 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 TUBB1Q9H4B7 451 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 CDH7Q9ULB5 785 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 COPG1Q9Y678 874 aaKnown RBP12.41□□□□□ -0.42
GGPS1-202ENST00000358966 PIP5K1BO14986 540 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 EPHX1P07099 455 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 ELFN1P0C7U0 828 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 LINC00032P0C843 101 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 VIPR1P32241 457 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 ATP6V0D1P61421 351 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 POLR2LP62875 67 aaKnown RBP12.41□□□□□ -0.42
GGPS1-202ENST00000358966 RUNX3Q13761 415 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 ACAD11Q709F0 780 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 SNX32Q86XE0 403 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 DDIASQ8IXT1 998 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 ZBTB2Q8N680 514 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 PIP4K2CQ8TBX8 421 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 HGH1Q9BTY7 390 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 IRF2BPLQ9H1B7 796 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 FAM83DQ9H4H8 585 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 STN1Q9H668 368 aaKnown RBP12.41□□□□□ -0.42
GGPS1-202ENST00000358966 CLDND1Q9NY35 253 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 SLC27A6Q9Y2P4 619 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 PCDHB1Q9Y5F3 818 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 MYO10Q9HD67 2058 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 TRPM6Q9BX84 2022 aa12.41□□□□□ -0.42
GGPS1-202ENST00000358966 FUOMA2VDF0 154 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 SNX2O60749 519 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 KATNA1O75449 491 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 PIK3R1P27986 724 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 CPOXP36551 454 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 MMP12P39900 470 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 HSPA7P48741 367 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 RBBP7Q16576 425 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 UGT3A2Q3SY77 523 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 LIPIQ6XZB0 460 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 GK5Q6ZS86 529 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 SYVN1Q86TM6 617 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 HMGCLL1Q8TB92 370 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 CCDC124Q96CT7 223 aaKnown RBP12.4□□□□□ -0.42
GGPS1-202ENST00000358966 FAM161BQ96MY7 647 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 ZDHHC3Q9NYG2 299 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 GDE1Q9NZC3 331 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 PCTPQ9UKL6 214 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 SOBPA7XYQ1 873 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 AGAP14A8MT82 685 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 AIM2O14862 343 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 PBLDP30039 288 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-202ENST00000358966 NSG1P42857 185 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 PSMD8P48556 350 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 EIF2B2P49770 351 aaKnown RBP12.4□□□□□ -0.42
GGPS1-202ENST00000358966 CTSCP53634 463 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 E2F2Q14209 437 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 HNRNPA1L2Q32P51 320 aaKnown RBP12.4□□□□□ -0.42
GGPS1-202ENST00000358966 RAB44Q7Z6P3 723 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-202ENST00000358966 CBARPQ8N350 705 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-202ENST00000358966 TWIST2Q8WVJ9 160 aa12.4□□□□□ -0.42
GGPS1-202ENST00000358966 EML4Q9HC35 981 aaKnown RBP12.4□□□□□ -0.42
GGPS1-202ENST00000358966 E2F3O00716 465 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 FFAR2O15552 330 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 MMP20O60882 483 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 RPS17P08708 135 aaKnown RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 POU2F2P09086 479 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 TFPTP0C1Z6 253 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 COX4I1P13073 169 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 MSX2P35548 267 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 PGM1P36871 562 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 COPAP53621 1224 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 GRB7Q14451 532 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 GPR33Q49SQ1 333 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 FAM91A1Q658Y4 838 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 RAVER1Q8IY67 606 aaKnown RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 CDYL2Q8N8U2 506 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 C19orf60Q96EN9 201 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 VPS50Q96JG6 964 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms