RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 DEFA3P59666 94 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 CACNG1Q06432 222 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 GALNT1Q10472 559 aaPredicted RBP6.72□□□□□ -1.33
RTN4-203ENST00000357376 TRIM32Q13049 653 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 ABRAXAS2Q15018 415 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 SPDYE7PQ495Y7 208 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 GTDC1Q4AE62 458 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 NHSL2Q5HYW2 709 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 P2RY8Q86VZ1 359 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 PIANPQ8IYJ0 282 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 DTWD1Q8N5C7 304 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 ZBTB2Q8N680 514 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 PIK3C3Q8NEB9 887 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 MCFD2Q8NI22 146 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 SH3KBP1Q96B97 665 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 TMEM169Q96HH4 297 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 TEX37Q96LM6 180 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 FOPNLQ96NB1 174 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 OSER1Q9NX31 292 aa6.72□□□□□ -1.33
RTN4-203ENST00000357376 ARIH1Q9Y4X5 557 aaPredicted RBP6.72□□□□□ -1.33
RTN4-203ENST00000357376 GLYATL1P3A0A0U1RQE8 302 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 TARM1B6A8C7 271 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 TMX2-CTNND1H3BSU7 103 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 CNOT3O75175 753 aaKnown RBP6.71□□□□□ -1.33
RTN4-203ENST00000357376 OR56A5P0C7T3 313 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 PRKAR2AP13861 404 aaKnown RBP6.71□□□□□ -1.33
RTN4-203ENST00000357376 GKP32189 559 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 KIR3DL1P43629 444 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 TUFMP49411 452 aaKnown RBP6.71□□□□□ -1.33
RTN4-203ENST00000357376 CDH4P55283 916 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 ERVPABLB-1P60509 514 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 NFATC3Q12968 1075 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 DNASE1L3Q13609 305 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 APOFQ13790 326 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 LETMD1Q6P1Q0 360 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 MBOAT1Q6ZNC8 495 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 ANKS3Q6ZW76 656 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 GALNT10Q86SR1 603 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 HIPK1Q86Z02 1210 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 FAM9CQ8IZT9 166 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 OR9Q1Q8NGQ5 310 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 OTULINQ96BN8 352 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 ABHD8Q96I13 439 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 FUBP3Q96I24 572 aaKnown RBP eCLIP6.71□□□□□ -1.332e-9■■■□□ 14.6
RTN4-203ENST00000357376 C1orf74Q96LT6 269 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 BIRC8Q96P09 236 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 CDK5RAP1Q96SZ6 601 aaKnown RBP6.71□□□□□ -1.33
RTN4-203ENST00000357376 COPS8Q99627 209 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 C2orf49Q9BVC5 232 aaPredicted RBP6.71□□□□□ -1.33
RTN4-203ENST00000357376 RRAGCQ9HB90 399 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 GPBP1L1Q9HC44 474 aaPredicted RBP6.71□□□□□ -1.33
RTN4-203ENST00000357376 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.71□□□□□ -1.33
RTN4-203ENST00000357376 CD84Q9UIB8 345 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 PCTPQ9UKL6 214 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 PCDHB3Q9Y5E6 796 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 MCM3APO60318 1980 aa6.71□□□□□ -1.33
RTN4-203ENST00000357376 LOC100130705A0A1B0GUX0 176 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 A0A1B0GVM2 712 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 OR6C75A6NL08 312 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 UPK3BL1B0FP48 263 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 LOC730098B7Z3J9 87 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 UPK3BL2E5RIL1 263 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 H0Y858 1186 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 ABCB7O75027 752 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 EEDO75530 441 aaKnown RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 CLPXO76031 633 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 CLDN9O95484 217 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 GLUD1P00367 558 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 ZNF865P0CJ78 1059 aaPredicted RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 CYP2A7P20853 494 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 SERPINA4P29622 427 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 NNMTP40261 264 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 RPL34P49207 117 aaKnown RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 HLCSP50747 726 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 ATN1P54259 1190 aaPredicted RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 RPS14P62263 151 aaKnown RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 ELAVL2Q12926 359 aaKnown RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 ABRQ12979 859 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 RFX4Q33E94 735 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 RFTN2Q52LD8 501 aaPredicted RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 INO80DQ53TQ3 878 aaPredicted RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 XKR6Q5GH73 641 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 GPR153Q6NV75 609 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 FAM171BQ6P995 826 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 BORAQ6PGQ7 559 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 C11orf96Q7Z7L8 435 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 ITIH5Q86UX2 942 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 SLC15A4Q8N697 577 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 STON2Q8WXE9 905 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 NELL1Q92832 810 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 MYOCQ99972 504 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 WDR12Q9GZL7 423 aaKnown RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 CSNK1G1Q9HCP0 422 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 NLE1Q9NVX2 485 aaPredicted RBP6.71□□□□□ -1.34
RTN4-203ENST00000357376 C1orf109Q9NX04 203 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 ADPRHL2Q9NX46 363 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 AASSQ9UDR5 926 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 CD300AQ9UGN4 299 aa6.71□□□□□ -1.34
RTN4-203ENST00000357376 PCDHB1Q9Y5F3 818 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms