RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 SUSD3Q96L08 255 aa11.57□□□□□ -0.56
COL9A1-202ENST00000357250 RETREG1Q9H6L5 497 aa11.57□□□□□ -0.56
COL9A1-202ENST00000357250 DNAAF2Q9NVR5 837 aaKnown RBP11.57□□□□□ -0.56
COL9A1-202ENST00000357250 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL9A1-202ENST00000357250 C2orf71A6NGG8 1288 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 STX16-NPEPL1H3BU86 382 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 STX16O14662 325 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 MAGEB3O15480 346 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 STBD1O95210 358 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CBSLP0DN79 551 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CBSP35520 551 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 NDUFV1P49821 464 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 MYBPC1Q00872 1141 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 TYSND1Q2T9J0 566 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 EIPR1Q53HC9 387 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CCDC157Q569K6 752 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 NCBP2-AS2Q69YL0 99 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 PAOXQ6QHF9 649 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 FAM180AQ6UWF9 173 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 RAB43Q86YS6 212 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 HID1Q8IV36 788 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 TTC29Q8NA56 475 aaPredicted RBP11.56□□□□□ -0.56
COL9A1-202ENST00000357250 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 TLE6Q9H808 572 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CPQQ9Y646 472 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 STYXL1Q9Y6J8 313 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CDH1P12830 882 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 INCA1Q0VD86 236 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CA9Q16790 459 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 LCN1P1Q5VSP4 162 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CCDC36Q8IYA8 594 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 LINC00471Q8N535 108 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 MINDY2Q8NBR6 621 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 OR10G6Q8NH81 332 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 LRTOMTQ8WZ04 291 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 HAVCR1Q96D42 359 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 C1QTNF1Q9BXJ1 281 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 ATG10Q9H0Y0 220 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 MRM3Q9HC36 420 aaKnown RBP11.56□□□□□ -0.56
COL9A1-202ENST00000357250 ABHD14A-ACY1A0A1B0GW23 586 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 FAM92AA1XBS5 289 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 HCRTO43612 131 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 KHKP50053 298 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 MVKQ03426 396 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 LRRC70Q7Z2Q7 622 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 PDCD10Q9BUL8 212 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 TMED5Q9Y3A6 229 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 LRRC72A6NJI9 287 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 XKRYO14609 159 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 NPPAP01160 153 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 IGFALSP35858 605 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CCR10P46092 362 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 PTPN5P54829 565 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 RBM48Q5RL73 367 aaKnown RBP11.56□□□□□ -0.56
COL9A1-202ENST00000357250 JAZF1Q86VZ6 243 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 TRPV3Q8NET8 790 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 OR10A6Q8NH74 314 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 CHCHD6Q9BRQ6 235 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 TMEM175Q9BSA9 504 aa11.56□□□□□ -0.56
COL9A1-202ENST00000357250 TMEM88BA6NKF7 163 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 DUXAA6NLW8 204 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 PPEF2O14830 753 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 AIREO43918 545 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 SCN2BO60939 215 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 KLHL18O94889 574 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 AOC1P19801 751 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 CCNIQ14094 377 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 ATAT1Q5SQI0 421 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 LDB1Q86U70 411 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-202ENST00000357250 CFAP206Q8IYR0 622 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 ZNF563Q8TA94 476 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 CD99L2Q8TCZ2 262 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 ZDHHC3Q9NYG2 299 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 TAS2R7Q9NYW3 318 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 CIDEBQ9UHD4 219 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 MATN2O00339 956 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 PAPSS2O95340 614 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-202ENST00000357250 TOP3BO95985 862 aaKnown RBP11.55□□□□□ -0.56
COL9A1-202ENST00000357250 AGR2O95994 175 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 SPATA31D3P0C874 917 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 SAGP10523 405 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-202ENST00000357250 ETS2P15036 469 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 PRKCHP24723 683 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 AQP1P29972 269 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 ARHGAP1Q07960 439 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 FAM174BQ3ZCQ3 159 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 TIGD5Q53EQ6 642 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 ADGRF1Q5T601 910 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 PLPP4Q5VZY2 271 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 SPATA31D4Q6ZUB0 917 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 VANGL1Q8TAA9 524 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-202ENST00000357250 CLEC4CQ8WTT0 213 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 ZNF354BQ96LW1 612 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 TWNKQ96RR1 684 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 DUSP26Q9BV47 211 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 C12orf65Q9H3J6 166 aaKnown RBP11.55□□□□□ -0.56
COL9A1-202ENST00000357250 RASSF1Q9NS23 344 aa11.55□□□□□ -0.56
COL9A1-202ENST00000357250 TEX264Q9Y6I9 313 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms