RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 MAP7Q14244 749 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ITIH4Q14624 930 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 IL11RAQ14626 422 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 TTC27Q6P3X3 843 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 C6orf15Q6UXA7 325 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 PACS1Q6VY07 963 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ZNF605Q86T29 641 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ADGRF3Q8IZF5 1079 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 KRT222Q8N1A0 295 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ZSCAN1Q8NBB4 408 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ACVR1CQ8NER5 493 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 FLVCR1-AS1Q8TAF5 88 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 CT55Q8WUE5 264 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 HEXDCQ8WVB3 486 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 UBXN4Q92575 508 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ZNF501Q96CX3 271 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 TRIM56Q9BRZ2 755 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 FGF21Q9NSA1 209 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 PAK5Q9P286 719 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 PLAGL1Q9UM63 463 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 CDYLQ9Y232 598 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 HEATR9A2RTY3 570 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 ZNF891A8MT65 544 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 CEP104O60308 925 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 CTSBP07858 339 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 ADRA1DP25100 572 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 PEBP1P30086 187 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 DLSTP36957 453 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 NSG1P42857 185 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 LMAN1P49257 510 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 SESN2P58004 480 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 RPS18P62269 152 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 LAMB3Q13751 1172 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 TRIP13Q15645 432 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 SKIDA1Q1XH10 827 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 ZNF789Q5FWF6 425 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 FAM69BQ5VUD6 431 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 C16orf46Q6P387 395 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 DRICH1Q6PGQ1 229 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 CES3Q6UWW8 571 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 TRIM73Q86UV7 250 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 PPP1R3BQ86XI6 285 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 ESX1Q8N693 406 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 ZFPM2Q8WW38 1151 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 ELMO1Q92556 727 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 TFGQ92734 400 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 MS4A14Q96JA4 679 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 TREX1Q9NSU2 369 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 STARD5Q9NSY2 213 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 SPHK1Q9NYA1 384 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 CIDEBQ9UHD4 219 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 RIMKLBQ9ULI2 386 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 TTC7AQ9ULT0 858 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 DRG1Q9Y295 367 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 BTRCQ9Y297 605 aa16.24■□□□□ 0.19
PDLIM7-201ENST00000355572 UBA6A0AVT1 1052 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 KLHL33A6NCF5 533 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 E7EVH7 732 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 AP2A2O94973 939 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 NDUFS1P28331 727 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 PRDX3P30048 256 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 CCR7P32248 378 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 POLE2P56282 527 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 GPS2Q13227 327 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 ZIC1Q15915 447 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 COLEC12Q5KU26 742 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 ANKRD22Q5VYY1 191 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 AFTPHQ6ULP2 937 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 MPP5Q8N3R9 675 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 CCDC89Q8N998 374 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 OR4L1Q8NH43 312 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 LCN9Q8WX39 176 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 LRRC45Q96CN5 670 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 CD180Q99467 661 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 ARHGAP9Q9BRR9 750 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 TWSG1Q9GZX9 223 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 SRMSQ9H3Y6 488 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 LHX9Q9NQ69 397 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 SYBUQ9NX95 663 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 RARRES3Q9UL19 164 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 COLEC10Q9Y6Z7 277 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 BOD1L1Q8NFC6 3051 aa16.23■□□□□ 0.19
PDLIM7-201ENST00000355572 GSAPA4D1B5 854 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 KRT87PA6NCN2 255 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 K7EM74 188 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 MGAT1P26572 445 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 CD151P48509 253 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 HSD11B2P80365 405 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 BASP1P80723 227 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 RPA4Q13156 261 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 GRB7Q14451 532 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 KRT33BQ14525 404 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 DEFB109BQ30KR1 87 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 KLHL35Q6PF15 583 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 TMEM151BQ8IW70 566 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 REXO1L1PQ8IX06 675 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 FAM20CQ8IXL6 584 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 OR6P1Q8NGX9 317 aa16.22■□□□□ 0.19
PDLIM7-201ENST00000355572 OR1L3Q8NH93 324 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms