RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 CBARPQ8N350 705 aaPredicted RBP21.37■■□□□ 1.01
SHMT1-202ENST00000352886 CPXM2Q8N436 756 aa21.37■■□□□ 1.01
SHMT1-202ENST00000352886 DTWD1Q8N5C7 304 aa21.37■■□□□ 1.01
SHMT1-202ENST00000352886 HM13Q8TCT9 377 aa21.37■■□□□ 1.01
SHMT1-202ENST00000352886 ZNF689Q96CS4 500 aaPredicted RBP21.37■■□□□ 1.01
SHMT1-202ENST00000352886 RNF145Q96MT1 663 aa21.37■■□□□ 1.01
SHMT1-202ENST00000352886 ABCG8Q9H221 673 aa21.37■■□□□ 1.01
SHMT1-202ENST00000352886 GPBP1L1Q9HC44 474 aaPredicted RBP21.37■■□□□ 1.01
SHMT1-202ENST00000352886 EIF3LQ9Y262 564 aaKnown RBP21.37■■□□□ 1.01
SHMT1-202ENST00000352886 MYOFQ9NZM1 2061 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 FKTNO75072 461 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 LDLRP01130 860 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 CA8P35219 290 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 TLE2Q04725 743 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 TTLL9Q3SXZ7 439 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 SGO1Q5FBB7 561 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 HS6ST3Q8IZP7 471 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 FIBINQ8TAL6 211 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 CYGBQ8WWM9 190 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 VWCEQ96DN2 955 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 CHID1Q9BWS9 393 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 ZFP14Q9HCL3 533 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 C8orf4Q9NR00 106 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 ZNF490Q9ULM2 529 aaPredicted RBP21.36■■□□□ 1.01
SHMT1-202ENST00000352886 NEUROG3Q9Y4Z2 214 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 CEPT1Q9Y6K0 416 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 ULK1O75385 1050 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 RPS6KA3P51812 740 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 ARHGEF7Q14155 803 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 TRIM60Q495X7 471 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 PYCR3Q53H96 274 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 MPP7Q5T2T1 576 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 LRRC66Q68CR7 880 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 ZNF786Q8N393 782 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 UBTD2Q8WUN7 234 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 SLC13A3Q8WWT9 602 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 TMIGD2Q96BF3 282 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 ASIC4Q96FT7 647 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 VPS50Q96JG6 964 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 VAPAQ9P0L0 249 aa21.36■■□□□ 1.01
SHMT1-202ENST00000352886 LOC730098B7Z3J9 87 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 KCNH1O95259 989 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 CLIC3O95833 236 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 C7P10643 843 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 EPB42P16452 691 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 GJA1P17302 382 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 CDH2P19022 906 aaPredicted RBP21.35■■□□□ 1.01
SHMT1-202ENST00000352886 NSG1P42857 185 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 TTC33Q6PID6 262 aaPredicted RBP21.35■■□□□ 1.01
SHMT1-202ENST00000352886 METTL3Q86U44 580 aaKnown RBP21.35■■□□□ 1.01
SHMT1-202ENST00000352886 MAGEE2Q8TD90 523 aaPredicted RBP21.35■■□□□ 1.01
SHMT1-202ENST00000352886 OSCP1Q8WVF1 389 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 VOPP1Q96AW1 172 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 ULK4Q96C45 1275 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 LYSMD1Q96S90 227 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 ZBTB18Q99592 522 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 NTMT1Q9BV86 223 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 RDH14Q9HBH5 336 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 PAK6Q9NQU5 681 aaPredicted RBP21.35■■□□□ 1.01
SHMT1-202ENST00000352886 TLR9Q9NR96 1032 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 TRIM17Q9Y577 477 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 AGAP14A8MT82 685 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 SLC28A1O00337 649 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 SEC24DO94855 1032 aaPredicted RBP21.35■■□□□ 1.01
SHMT1-202ENST00000352886 EBLN1P0CF75 366 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 SRCP12931 536 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 ALDH3B2P48448 385 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 TUBA4AP68366 448 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 IMPG1Q17R60 797 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 FAM174BQ3ZCQ3 159 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 SLC39A5Q6ZMH5 540 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 FBXL20Q96IG2 436 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 ZNF510Q9Y2H8 683 aa21.35■■□□□ 1.01
SHMT1-202ENST00000352886 NRG2O14511 850 aaPredicted RBP21.34■■□□□ 1.01
SHMT1-202ENST00000352886 DFNA5O60443 496 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 GNPDA1P46926 289 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 PRMT2P55345 433 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 SNRPD1P62314 119 aaKnown RBP21.34■■□□□ 1.01
SHMT1-202ENST00000352886 DEFB103AP81534 67 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 SLC7A9P82251 487 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 MAD2L1Q13257 205 aaPredicted RBP21.34■■□□□ 1.01
SHMT1-202ENST00000352886 ARHGEF6Q15052 776 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 TPRG1Q6ZUI0 275 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 CMTM8Q8IZV2 173 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 LIX1Q8N485 282 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 OR8J3Q8NGG0 315 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 SMPD3Q9NY59 655 aaPredicted RBP21.34■■□□□ 1.01
SHMT1-202ENST00000352886 THEGQ9P2T0 379 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 TRPS1Q9UHF7 1281 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 CDH1P12830 882 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 LAG3P18627 525 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 RPS9P46781 194 aaKnown RBP21.34■■□□□ 1.01
SHMT1-202ENST00000352886 KCTD21Q4G0X4 260 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 TRIM46Q7Z4K8 759 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 RGL4Q8IZJ4 473 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 SCRN2Q96FV2 425 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 DPY30Q9C005 99 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 SMG9Q9H0W8 520 aaKnown RBP21.34■■□□□ 1.01
SHMT1-202ENST00000352886 KCTD5Q9NXV2 234 aa21.34■■□□□ 1.01
SHMT1-202ENST00000352886 SEC22BO75396 215 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms