RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 VRK3Q8IV63 474 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 SFTPA1Q8IWL2 248 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 DDIASQ8IXT1 998 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 KLHDC8AQ8IYD2 350 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 MIER2Q8N344 545 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 TCAIMQ8N3R3 496 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 SFRP1Q8N474 314 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 CDYL2Q8N8U2 506 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 RASGEF1AQ8N9B8 481 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 OR4F6Q8NGB9 312 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 OR9I1Q8NGQ6 314 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 PIP4K2CQ8TBX8 421 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 UCMAQ8WVF2 138 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 NRG4Q8WWG1 115 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 PPP2R3CQ969Q6 453 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 ELSPBP1Q96BH3 223 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 MYADMQ96S97 322 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 CDRT15Q96T59 188 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 ACOX2Q99424 681 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 SERPINI1Q99574 410 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 NPAS2Q99743 824 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 GDF15Q99988 308 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 GPATCH1Q9BRR8 931 aaKnown RBP6.78□□□□□ -1.32
TRIM55-203ENST00000350034 HDAC8Q9BY41 377 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 MRPL1Q9BYD6 325 aaKnown RBP6.78□□□□□ -1.32
TRIM55-203ENST00000350034 SLC29A3Q9BZD2 475 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 S1PR5Q9H228 398 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 IPPKQ9H8X2 491 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 PARVBQ9HBI1 364 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 S100A14Q9HCY8 104 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 PRSS16Q9NQE7 514 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 HEBP1Q9NRV9 189 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 RIC8BQ9NVN3 520 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 WWOXQ9NZC7 414 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 MAP10Q9P2G4 905 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 STOML1Q9UBI4 398 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 OPTCQ9UBM4 332 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 TRPS1Q9UHF7 1281 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 ITM2BQ9Y287 266 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 ATG2AQ2TAZ0 1938 aa6.78□□□□□ -1.32
TRIM55-203ENST00000350034 MYO7AQ13402 2215 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 NCOR1O75376 2440 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 SERTM1A2A2V5 107 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 NPIPB8E9PQR5 432 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 H0Y3Z8 333 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 RFXAPO00287 272 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 KPNA3O00505 521 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 TRIM38O00635 465 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ACOT8O14734 319 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 MRASO14807 208 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GIPC1O14908 333 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ANKRD28O15084 1053 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 LSM1O15116 133 aaKnown RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 LILRB5O75023 590 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 PSIP1O75475 530 aaKnown RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 STK16O75716 305 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 BCAS2O75934 225 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 RECQL5O94762 991 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 KAT7O95251 611 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GUCA1CO95843 209 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 CAPN1P07384 714 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GSTM1P09488 218 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ELFN1P0C7U0 828 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ADRB3P13945 408 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ANPEPP15144 967 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 PSMC3P17980 439 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 CAPN3P20807 821 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 AKT1P31749 480 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GRIA2P42262 883 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 IL12RB1P42701 662 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GDF5P43026 501 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 PTDSS1P48651 473 aaKnown RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 RPIAP49247 311 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 HNMTP50135 292 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 THOP1P52888 689 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 CTSCP53634 463 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 DIO3P55073 304 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 AP1S2P56377 157 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GSTM4Q03013 218 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 EMX2Q04743 252 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 HSPA14Q0VDF9 509 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ACOX1Q15067 660 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 POM121L1PQ3SYA9 428 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GGTA1PQ4G0N0 100 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 TCHHL1Q5QJ38 904 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ATAT1Q5SQI0 421 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF648Q5T619 568 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ICE2Q659A1 982 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 TLDC1Q6P9B6 456 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 BLOC1S3Q6QNY0 202 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 XKR5Q6UX68 686 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 RNF111Q6ZNA4 994 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 UBE2R2Q712K3 238 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ERN2Q76MJ5 926 aaKnown RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 DET1Q7L5Y6 550 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 TRIM46Q7Z4K8 759 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 KBTBD6Q86V97 674 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GALNT13Q8IUC8 556 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 EFCAB3Q8N7B9 438 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 L3MBTL4Q8NA19 623 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms