RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PSMB9P28065 219 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 CDH5P33151 784 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 LSM3P62310 102 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 CSTF1Q05048 431 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 FAM98BQ52LJ0 330 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 KLHL26Q53HC5 615 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 NEK10Q6ZWH5 1172 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ASRGL1Q7L266 308 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 NAT14Q8WUY8 206 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 RAB7BQ96AH8 199 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 BDH2Q9BUT1 245 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 C9orf16Q9BUW7 83 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 DDX28Q9NUL7 540 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 WNT6Q9Y6F9 365 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ANKRD36CQ5JPF3 1778 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 NRP2O60462 931 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 FOXD2O60548 495 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 RPP40O75818 363 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ERCC1P07992 297 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 GALK1P51570 392 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 NR1H2P55055 460 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 HNRNPKP61978 463 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 NRG1Q02297 640 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 TIGD2Q4W5G0 525 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 SFT2D3Q587I9 215 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 C17orf99Q6UX52 265 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 B3GNT9Q6UX72 402 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ABHD13Q7L211 337 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 RDH11Q8TC12 318 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 SLC39A3Q9BRY0 314 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 DHRS12A0PJE2 317 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 DNAJA2O60884 412 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ECDO95905 644 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 BMP7P18075 431 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 FEN1P39748 380 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 TAS2R39P59534 338 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 DGCR6Q14129 220 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 NR1D2Q14995 579 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ARMC3Q5W041 872 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ZBTB2Q8N680 514 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ATG16L2Q8NAA4 619 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 SCAMP5Q8TAC9 235 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 POP5Q969H6 163 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 HERC2P3Q9BVR0 1158 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 USP29Q9HBJ7 922 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 ZDHHC7Q9NXF8 308 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 A0A087WXM4 84 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 RBM47A0AV96 593 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 OR51F1A6NGY5 319 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 CASKO14936 926 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 DEAF1O75398 565 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 IPO13O94829 963 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 APBB3O95704 486 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 NR2C1P13056 603 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 PKMP14618 531 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 TMED10P49755 219 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 SLC10A2Q12908 348 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 SLC13A2Q13183 592 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 PCLAFQ15004 111 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 SLC9A4Q6AI14 798 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 PTCRAQ6ISU1 281 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 TMEM220Q6QAJ8 160 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 RPTNQ6XPR3 784 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 RTL10Q7L3V2 364 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 SLC29A4Q7RTT9 530 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 LRRTM4Q86VH4 590 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 PRSS58Q8IYP2 241 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 PPCDCQ96CD2 204 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 TEPSINQ96N21 525 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 B3GAT2Q9NPZ5 323 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 PAIP2BQ9ULR5 123 aaKnown RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 PHF24Q9UPV7 400 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 LRRC42Q9Y546 428 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 CLCA3PQ9Y6N3 262 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 MYOCOSA0A1B0GUC4 107 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 SORBS2O94875 1100 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 BCL10O95999 233 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 T-ENOLP0DO92 83 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 DCTN2Q13561 401 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 REP15Q6BDI9 236 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 RALGPS2Q86X27 583 aaPredicted RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF276Q8N554 614 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 Q8N9G6 341 aaPredicted RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 CAMKVQ8NCB2 501 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 TOX2Q96NM4 488 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 HIST1H2AAQ96QV6 131 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 CDADC1Q9BWV3 514 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 PRDM8Q9NQV8 689 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 SCML1Q9UN30 329 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 SMIM31A0A1B0GVY4 71 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 ABLIM1O14639 778 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 AZIN1O14977 448 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 ARHGEF9O43307 516 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 LINGO3P0C6S8 592 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 UGT1A5P35504 534 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 SLC1A2P43004 574 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 CRATP43155 626 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 UTS2BQ765I0 119 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 TP53INP2Q8IXH6 220 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 419 ms