RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SEMA4BQ9NPR2 832 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 CD274Q9NZQ7 290 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MSRAQ9UJ68 235 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SARDHQ9UL12 918 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SLC8A2Q9UPR5 921 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 PTGDR2Q9Y5Y4 395 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MUC22E2RYF6 1773 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 BRWD1Q9NSI6 2320 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 PRUNE2Q8WUY3 3088 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 C16orf96A6NNT2 1141 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 RPS17P08708 135 aaKnown RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 CYP2A6P11509 494 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 PRDX3P30048 256 aaKnown RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ETV3P41162 512 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 RANBP1P43487 201 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ST8SIA6P61647 398 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 RALGDSQ12967 914 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 TGFBIQ15582 683 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF805Q5CZA5 627 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 GPRC6AQ5T6X5 926 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ANKS6Q68DC2 871 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 SYCE2Q6PIF2 218 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 TXNDC11Q6PKC3 985 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 SBSNQ6UWP8 590 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 VITQ6UXI7 678 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 Q6ZVL8 140 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 DET1Q7L5Y6 550 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 AFAP1L2Q8N4X5 818 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ZBTB2Q8N680 514 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 CPSF7Q8N684 471 aaKnown RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 AGAP11Q8TF27 550 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ANAPC16Q96DE5 110 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 CMTM5Q96DZ9 223 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 PDLIM5Q96HC4 596 aaKnown RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 C3orf30Q96M34 536 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 COPS8Q99627 209 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 THTPAQ9BU02 230 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 SPATA16Q9BXB7 569 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 PLA2G2FQ9BZM2 168 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 MMADHCQ9H3L0 296 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ZBTB26Q9HCK0 441 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ZDHHC4Q9NPG8 344 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 TRPV5Q9NQA5 729 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 GDE1Q9NZC3 331 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 PKD2L2Q9NZM6 624 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 DEC1Q9P2X7 70 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ADAMTS6Q9UKP5 1117 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ITM2BQ9Y287 266 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 COPG1Q9Y678 874 aaKnown RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ATP6AP2A0A1C7CYW4 349 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 STX16-NPEPL1H3BU86 382 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 STX16O14662 325 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 AZIN1O14977 448 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 SNX2O60749 519 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ENTPD5O75356 428 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 MTX2O75431 263 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 E2F6O75461 281 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ATP6AP2O75787 350 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 NSG1P42857 185 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 INHBCP55103 352 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 HYAL1Q12794 435 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 LCP2Q13094 533 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 CUL3Q13618 768 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF423Q2M1K9 1284 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 FNDC3BQ53EP0 1204 aaKnown RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 PARS2Q7L3T8 475 aaKnown RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 CLYBLQ8N0X4 340 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 PELI3Q8N2H9 469 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 KIAA1958Q8N8K9 716 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 CEP70Q8NHQ1 597 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 ACTRT2Q8TDY3 377 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 NUDT8Q8WV74 236 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 C1orf21Q9H246 121 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 CLEC4MQ9H2X3 399 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 SLC28A3Q9HAS3 691 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 TRPV4Q9HBA0 871 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 EIF2B4Q9UI10 523 aaKnown RBP9.07□□□□□ -0.96
ATG4A-202ENST00000345734 PCTPQ9UKL6 214 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 DNAJC15Q9Y5T4 150 aa9.07□□□□□ -0.96
ATG4A-202ENST00000345734 IGLV3-16A0A075B6K0 115 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 PLK4O00444 970 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 KPNA3O00505 521 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF30P17039 623 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 ITGAXP20702 1163 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 XPAP23025 273 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-202ENST00000345734 DGKAP23743 735 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 PRDX6P30041 224 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 ADH7P40394 386 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 DNAL1Q4LDG9 190 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF648Q5T619 568 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-202ENST00000345734 C9orf64Q5T6V5 341 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 MFSD4BQ5TF39 518 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 KANK2Q63ZY3 851 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 FRA10AC1Q70Z53 315 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 VN1R5Q7Z5H4 357 aa9.06□□□□□ -0.96
ATG4A-202ENST00000345734 SYVN1Q86TM6 617 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms