RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 KLHL36Q8N4N3 616 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 FITM2Q8N6M3 262 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 ETNPPLQ8TBG4 499 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 DPF2Q92785 391 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 BORCS7Q96B45 105 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 ELMO3Q96BJ8 720 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 ADAM2Q99965 735 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 ITPAQ9BY32 194 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 ARL15Q9NXU5 204 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 TAS2R10Q9NYW0 307 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 A0A0J9YYE9 177 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 ZNF821O75541 412 aaPredicted RBP6.09□□□□□ -1.44
VCAN-203ENST00000343200 BEST1O76090 585 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 CYP11A1P05108 521 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 DBIP07108 87 aaKnown RBP6.09□□□□□ -1.44
VCAN-203ENST00000343200 CHRNB2P17787 502 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 AXLP30530 894 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 TLX1P31314 330 aaPredicted RBP6.09□□□□□ -1.44
VCAN-203ENST00000343200 PDIA6Q15084 440 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 HLA-DQA1Q5Y7H0 255 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 FAM111BQ6SJ93 734 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 NAPRTQ6XQN6 538 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 ARHGAP12Q8IWW6 846 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 TMEM199Q8N511 208 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 CPSF7Q8N684 471 aaKnown RBP6.09□□□□□ -1.44
VCAN-203ENST00000343200 ZNF486Q96H40 463 aaPredicted RBP6.09□□□□□ -1.44
VCAN-203ENST00000343200 VAT1Q99536 393 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 FAM126AQ9BYI3 521 aaPredicted RBP6.09□□□□□ -1.44
VCAN-203ENST00000343200 AGXT2Q9BYV1 514 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 SPG11Q96JI7 2443 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PATJQ8NI35 1801 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 A0A087WZ62 844 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 AGAP14A8MT82 685 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 A8MV72 311 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 CIDEAO60543 219 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SOX30O94993 753 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PROS1P07225 676 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 UROSP10746 265 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 JUNDP17535 347 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CXCR2P25025 360 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CRHR1P34998 444 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PSMA6P60900 246 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 REEP5Q00765 189 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 BST1Q10588 318 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 BTN1A1Q13410 526 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 HEPACAMQ14CZ8 416 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 TGFBIQ15582 683 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ARHGAP11AQ6P4F7 1023 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 USP17L6PQ6QN14 398 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 VTCN1Q7Z7D3 282 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 NT5DC3Q86UY8 548 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 DENND1CQ8IV53 801 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 UCMAQ8WVF2 138 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ARMC5Q96C12 935 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ACSS3Q9H6R3 686 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ALG9Q9H6U8 611 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 TLR8Q9NR97 1041 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 C14orf105Q9NVL8 296 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PRKAB1Q9Y478 270 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 HECW2Q9P2P5 1572 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 H7C1W4 665 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SLC28A1O00337 649 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 MT-CO1P00395 513 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 F9P00740 461 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 HGFP14210 728 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 XRCC1P18887 633 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 MAOAP21397 527 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CPN2P22792 545 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CDH5P33151 784 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 PRKXP51817 358 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 GUK1Q16774 197 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SPATA19Q7Z5L4 167 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PAPD5Q8NDF8 572 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 SLITRK1Q96PX8 696 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 TBCBQ99426 244 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 FAIM2Q9BWQ8 316 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 NMUR2Q9GZQ4 415 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 DHX33Q9H6R0 707 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 ACTR3BQ9P1U1 418 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 RNF6Q9Y252 685 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ZCCHC11Q5TAX3 1644 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 C20orf202A1L168 122 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 OR6C65A6NJZ3 312 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 RHPN2P1A8MT19 583 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 F5H0A9 414 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 K7EPI3 171 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 RHOP08100 348 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 TFPTP0C1Z6 253 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ZNF135P52742 658 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 KCNV1Q6PIU1 500 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ADAMTSL2Q86TH1 951 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 NLRP8Q86W28 1048 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SAMD14Q8IZD0 417 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 BEST3Q8N1M1 668 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CSGALNACT1Q8TDX6 532 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 HTR3CQ8WXA8 447 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PIWIL1Q96J94 861 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 TLR10Q9BXR5 811 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ENY2Q9NPA8 101 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 KBTBD4Q9NVX7 518 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms