RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PSMD8P48556 350 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PTPN5P54829 565 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 SEC13P55735 322 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 FCHO2Q0JRZ9 810 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 CNTN1Q12860 1018 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PTCHD3Q3KNS1 767 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 XKR7Q5GH72 579 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 IER5LQ5T953 404 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 TMEM220Q6QAJ8 160 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 DPPA4Q7L190 304 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 KIRREL3Q8IZU9 778 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF557Q8N988 423 aaPredicted RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 FNDC5Q8NAU1 212 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 FAM110BQ8TC76 370 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 STMN2Q93045 179 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 GLYATL1Q969I3 302 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 ASB2Q96Q27 587 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 MRPL1Q9BYD6 325 aaKnown RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 OR2AG1Q9H205 316 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC52A3Q9NQ40 469 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 STX18Q9P2W9 335 aaKnown RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 TMEM98Q9Y2Y6 226 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 GIPC1O14908 333 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 AREL1O15033 823 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 POU2F2P09086 479 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PRR35P0CG20 571 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 C6P13671 934 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 ANPEPP15144 967 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 P2RY2P41231 377 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PSME3P61289 254 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 ILF2Q12905 390 aaKnown RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 GBX1Q14549 363 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PREPLQ4J6C6 727 aaPredicted RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 C2orf27AQ580R0 203 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PAGE3Q5JUK9 113 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 ANKRD54Q6NXT1 300 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 BNC2Q6ZN30 1099 aaPredicted RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PGAM4Q8N0Y7 254 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 KLK6Q92876 244 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 MRPL38Q96DV4 380 aaKnown RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 COQ10AQ96MF6 247 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 C19orf43Q9BQ61 176 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 LGR4Q9BXB1 951 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 ACTL8Q9H568 366 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 SDR39U1Q9NRG7 319 aaPredicted RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 INTS7Q9NVH2 962 aaKnown RBP7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 NMRK1Q9NWW6 199 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 OPTCQ9UBM4 332 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 DKK3Q9UBP4 350 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 KLQ9UEF7 1012 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 MSRAQ9UJ68 235 aa7.24□□□□□ -1.25
SRFBP1-201ENST00000339397 PRR23AA6NEV1 266 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 MRASO14807 208 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 MID1O15344 667 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 SYNCRIPO60506 623 aaKnown RBP7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 SH3BGRLO75368 114 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 STK16O75716 305 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 PRNPP04156 253 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ASLP04424 464 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 G6PDP11413 515 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 LAMP2P13473 410 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 EZRP15311 586 aaKnown RBP7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 PSMC3P17980 439 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ADSLP30566 484 aaPredicted RBP7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 RGS19P49795 217 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 MRPS22P82650 360 aaKnown RBP7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC34A1Q06495 639 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ELAVL3Q14576 367 aaKnown RBP7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 PTGR1Q14914 329 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 RPS6KA2Q15349 733 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF284Q2VY69 593 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ICE2Q659A1 982 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ADNP2Q6IQ32 1131 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 XKR5Q6UX68 686 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF547Q8IVP9 402 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 RAVER1Q8IY67 606 aaKnown RBP7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 CHPFQ8IZ52 775 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 TRAM1L1Q8N609 369 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 DDHD1Q8NEL9 900 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 PROKR1Q8TCW9 393 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 WFIKKN2Q8TEU8 576 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 OR8D1Q8WZ84 308 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 DTD2Q96FN9 168 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ZSCAN5AQ9BUG6 496 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC12A9Q9BXP2 914 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 PARVBQ9HBI1 364 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 TM7SF3Q9NS93 570 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 CCL27Q9Y4X3 112 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ANGPTL3Q9Y5C1 460 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 MYO10Q9HD67 2058 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 NUP210Q8TEM1 1887 aaPredicted RBP7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 EDDM13A0A1B0GTR0 161 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 ARHGEF33A8MVX0 844 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 H3BNX3 289 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 GFYI3L273 518 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 K7EPI3 171 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 LSM1O15116 133 aaKnown RBP7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC22A2O15244 555 aa7.23□□□□□ -1.25
SRFBP1-201ENST00000339397 MAP3K7O43318 606 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms