RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SYTL1Q8IYJ3 562 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 CFAP206Q8IYR0 622 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 ACVR1CQ8NER5 493 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 HAUS1Q96CS2 278 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 DCUN1D1Q96GG9 259 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 LINC00615Q96LM1 132 aaPredicted RBP15.19■□□□□ 0.02
LINC01116-202ENST00000339037 QKIQ96PU8 341 aaKnown RBP eCLIP15.19■□□□□ 0.02
LINC01116-202ENST00000339037 SLC29A3Q9BZD2 475 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 SRMSQ9H3Y6 488 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 ASB8Q9H765 288 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 ACTR5Q9H9F9 607 aaPredicted RBP15.19■□□□□ 0.02
LINC01116-202ENST00000339037 SYTL2Q9HCH5 934 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 GPR83Q9NYM4 423 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 TRHDEQ9UKU6 1024 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 TFR2Q9UP52 801 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 HEBP2Q9Y5Z4 205 aa15.19■□□□□ 0.02
LINC01116-202ENST00000339037 A6NL46 340 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 TCP11X1B4DZS4 312 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 ZNF185O15231 689 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 LCA5LO95447 670 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 MSL3P1P0C860 447 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 RALBP11234 206 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 MARCKSL1P49006 195 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 RRADP55042 308 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 ITGA1P56199 1179 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 TAF1AQ15573 450 aaPredicted RBP15.18■□□□□ 0.02
LINC01116-202ENST00000339037 SARM1Q6SZW1 724 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 FAM198BQ6UWH4 519 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 MED25Q71SY5 747 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 DAAM2Q86T65 1068 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 HPS6Q86YV9 775 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 TMEM102Q8N9M5 508 aaPredicted RBP15.18■□□□□ 0.02
LINC01116-202ENST00000339037 Q8NA96 180 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 OR4K2Q8NGD2 314 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 OR1L3Q8NH93 324 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 HM13Q8TCT9 377 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 LCN9Q8WX39 176 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 CCM2Q9BSQ5 444 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 FICDQ9BVA6 458 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 NUDT9Q9BW91 350 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 SLC7A5P2Q9GIP4 190 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 PCMTD2Q9NV79 361 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 MAP10Q9P2G4 905 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 FKBPLQ9UIM3 349 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 ABCA12Q86UK0 2595 aa15.18■□□□□ 0.02
LINC01116-202ENST00000339037 C5orf60A6NFR6 353 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 HACD1B0YJ81 288 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 SGTAO43765 313 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 ANXA9O76027 345 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 AGTP01019 485 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 CAPN1P07384 714 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 RNF224P0DH78 156 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 VARSP26640 1264 aaKnown RBP15.17■□□□□ 0.02
LINC01116-202ENST00000339037 MAGEA1P43355 309 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 PRLHRP49683 370 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 HADHBP55084 474 aaKnown RBP15.17■□□□□ 0.02
LINC01116-202ENST00000339037 NCF4Q15080 339 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 TUSC1Q2TAM9 212 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 PTCHD3Q3KNS1 767 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 ZNF789Q5FWF6 425 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 SLC6A19Q695T7 634 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 CCDC50Q8IVM0 306 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 LILRA3Q8N6C8 439 aaPredicted RBP15.17■□□□□ 0.02
LINC01116-202ENST00000339037 PNPLA2Q96AD5 504 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 DPH2Q9BQC3 489 aaPredicted RBP15.17■□□□□ 0.02
LINC01116-202ENST00000339037 PITPNM3Q9BZ71 974 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 TRIM5Q9C035 493 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 GBA3Q9H227 469 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 CASS4Q9NQ75 786 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 CRLS1Q9UJA2 301 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 SERTAD3Q9UJW9 196 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 ALG6Q9Y672 507 aa15.17■□□□□ 0.02
LINC01116-202ENST00000339037 hCG_1818297A0A087WSY0 165 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 A1L4Q6 167 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 CCDC66A2RUB6 948 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 C9J4A7 227 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 CFAP99D6REC4 459 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 ST6GAL1P15907 406 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 PRDX3P30048 256 aaKnown RBP15.16■□□□□ 0.02
LINC01116-202ENST00000339037 LMAN1P49257 510 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 GEMP55040 296 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 MRPL49Q13405 166 aaKnown RBP15.16■□□□□ 0.02
LINC01116-202ENST00000339037 ATP1A4Q13733 1029 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 EIF2S3LQ2VIR3 472 aaKnown RBP15.16■□□□□ 0.02
LINC01116-202ENST00000339037 ITPRIPL1Q6GPH6 555 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 NXPE1Q8N323 547 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 ZBTB2Q8N680 514 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 RBMXL3Q8N7X1 1067 aaKnown RBP15.16■□□□□ 0.02
LINC01116-202ENST00000339037 GLIS1Q8NBF1 620 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 ULK4Q96C45 1275 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 COPS8Q99627 209 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 PADI2Q9Y2J8 665 aa15.16■□□□□ 0.02
LINC01116-202ENST00000339037 PIKFYVEQ9Y2I7 2098 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 AGAP14A8MT82 685 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 E7EQ34 232 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 IFRD1O00458 451 aaPredicted RBP15.15■□□□□ 0.02
LINC01116-202ENST00000339037 BTN3A3O00478 584 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 BTN3A1O00481 513 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 ZRANB2O95218 330 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC01116-202ENST00000339037 DDAH2O95865 285 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms