RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 LAPTM4BQ86VI4 370 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 PARGQ86W56 976 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 ARL14EPQ8N8R7 260 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 SKA1Q96BD8 255 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 C11orf24Q96F05 449 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 RACGAP1Q9H0H5 632 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 HIPK3Q9H422 1215 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 TBC1D14Q9P2M4 693 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 ZNF221Q9UK13 617 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 CPQQ9Y646 472 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 ECI2O75521 394 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 C9P02748 559 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 C8GP07360 202 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 RGS8P57771 180 aaPredicted RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 MXD1Q05195 221 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 PPP1R8Q12972 351 aaKnown RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 IL18Q14116 193 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 KIAA1324Q6UXG2 1013 aaKnown RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 OR10G6Q8NH81 332 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 TOP1MTQ969P6 601 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 GPATCH1Q9BRR8 931 aaKnown RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 MPZL2O60487 215 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 IFNGP01579 166 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 SAGP10523 405 aaPredicted RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 MOGSQ13724 837 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 SFT2D3Q587I9 215 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 PHYKPLQ8IUZ5 450 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 DNAJB8Q8NHS0 232 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 CYP2S1Q96SQ9 504 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 TTLL2Q9BWV7 592 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 GPR88Q9GZN0 384 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 CCDC177Q9NQR7 707 aaPredicted RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 SOHLH2Q9NX45 425 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 TTC24A2A3L6 582 aaPredicted RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 HCRTO43612 131 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 SNX4O95219 450 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 CDH1P12830 882 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 RPL17P18621 184 aaKnown RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 ECHS1P30084 290 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 DGKQP52824 942 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 TAF13Q15543 124 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 PLA2G4EQ3MJ16 856 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 CDCA2Q69YH5 1023 aaPredicted RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 AGMOQ6ZNB7 445 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 ENDOVQ8N8Q3 282 aaKnown RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 SRFBP1Q8NEF9 429 aaKnown RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 PYCR2Q96C36 320 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 NPY6RQ99463 290 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 OXCT2Q9BYC2 517 aaPredicted RBP13.53□□□□□ -0.24
RTN4-202ENST00000337526 IRAK3Q9Y616 596 aa13.53□□□□□ -0.24
RTN4-202ENST00000337526 CACNB4O00305 520 aaPredicted RBP13.52□□□□□ -0.24
RTN4-202ENST00000337526 BTN3A3O00478 584 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 BCAS2O75934 225 aaPredicted RBP13.52□□□□□ -0.24
RTN4-202ENST00000337526 CCNB2O95067 398 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 ADH1CP00326 375 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 UGT1A6P19224 532 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 UGT1A1P22309 533 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 UGT1A4P22310 534 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 UGT1A3P35503 534 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 UGT1A5P35504 534 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 PDSS2Q86YH6 399 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 DPF3Q92784 378 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 KAT2AQ92830 837 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 C8orf48Q96LL4 319 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 DUSP26Q9BV47 211 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 ADAM7Q9H2U9 754 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 MAP10Q9P2G4 905 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 J3KR12 359 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 GTPBP1O00178 669 aaKnown RBP13.52□□□□□ -0.24
RTN4-202ENST00000337526 TBX1O43435 398 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 PRKD3O94806 890 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 GGT5P36269 586 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 RFTN1Q14699 578 aaPredicted RBP13.52□□□□□ -0.24
RTN4-202ENST00000337526 SIRPB2Q5JXA9 342 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 PHPT1Q9NRX4 125 aaPredicted RBP13.52□□□□□ -0.24
RTN4-202ENST00000337526 ACTR3BQ9P1U1 418 aa13.52□□□□□ -0.24
RTN4-202ENST00000337526 ARHGEF33A8MVX0 844 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 NRP1O14786 923 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 GADD45GO95257 159 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 SDC2P34741 201 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 CCR10P46092 362 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 SEMG2Q02383 582 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 GALNT2Q10471 571 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 CBX3Q13185 183 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 HEPACAMQ14CZ8 416 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 C5orf22Q49AR2 442 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 PDE12Q6L8Q7 609 aaKnown RBP13.52□□□□□ -0.25
RTN4-202ENST00000337526 PIM3Q86V86 326 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 FAM98AQ8NCA5 519 aaKnown RBP13.52□□□□□ -0.25
RTN4-202ENST00000337526 RASSF5Q8WWW0 418 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 SLC9A6Q92581 669 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 GIN1Q9NXP7 522 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 ABHD14A-ACY1A0A1B0GW23 586 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 FAM92AA1XBS5 289 aa13.52□□□□□ -0.25
RTN4-202ENST00000337526 CHST10O43529 356 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms