RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KIAA1522Q9P206 1035 aaPredicted RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.68□□□□□ -1.02
SNCA-201ENST00000336904 DLGAP4Q9Y2H0 992 aa8.68□□□□□ -1.02
SNCA-201ENST00000336904 STX16O14662 325 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 EI24O14681 340 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 LEFTY1O75610 366 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 RPIAP49247 311 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 ACADVLP49748 655 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 TCEA2Q15560 299 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 MPPE1Q53F39 396 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 ADAMTSL2Q86TH1 951 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 LSRQ86X29 649 aaPredicted RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 RGL4Q8IZJ4 473 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 OR10A6Q8NH74 314 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 MAGEE2Q8TD90 523 aaPredicted RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 ZNF382Q96SR6 550 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 THUMPD3Q9BV44 507 aaKnown RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 ZBP1Q9H171 429 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 CARS2Q9HA77 564 aaKnown RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 PAPOLBQ9NRJ5 636 aaKnown RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 PDP2Q9P2J9 529 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 SARDHQ9UL12 918 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 SLC22A14Q9Y267 594 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 PRKAB1Q9Y478 270 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 PCDHA9Q9Y5H5 950 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 GRXCR1A8MXD5 290 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 WASH3PC4AMC7 463 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 WDR47O94967 919 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 CLPTM1O96005 669 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 TFAP2AP05549 437 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 HRH2P25021 359 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 SLC7A1P30825 629 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 VIPR2P41587 438 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 PGS1Q32NB8 556 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 PABPC1LQ4VXU2 614 aaKnown RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 GPRC6AQ5T6X5 926 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 KRT80Q6KB66 452 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 FAM180BQ6P0A1 224 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 UBE2R2Q712K3 238 aaPredicted RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 TMEM199Q8N511 208 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 RHBDF1Q96CC6 855 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 MED8Q96G25 268 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 LRRC3BQ96PB8 259 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 MTERF1Q99551 399 aaKnown RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 COPS8Q99627 209 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 NUDT4Q9NZJ9 180 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 STOML2Q9UJZ1 356 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 PDE10AQ9Y233 779 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 U3KQV3 271 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 H7C0S8 307 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 HTRA2O43464 458 aaPredicted RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 B4GAT1O43505 415 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 KLK8O60259 260 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 PRAMEF4O60810 478 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 OLFM2O95897 454 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 PDYNP01213 254 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 GBAP04062 536 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 HSPA8P11142 646 aaKnown RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 ZNF23P17027 643 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 CTNNB1P35222 781 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 RGS4P49798 205 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 CLCN4P51793 760 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 SNRPD1P62314 119 aaKnown RBP8.67□□□□□ -1.02
SNCA-201ENST00000336904 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNCA-201ENST00000336904 PRAMEF9Q5VWM5 478 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 ENPP6Q6UWR7 440 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 GCNT7Q6ZNI0 430 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 C12orf40Q86WS4 652 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 ADGRG5Q8IZF4 528 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 ZNF786Q8N393 782 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 ADCY4Q8NFM4 1077 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 P2RY13Q9BPV8 354 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 EXD2Q9NVH0 621 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 RIC8BQ9NVN3 520 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 SMOXQ9NWM0 555 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 RIMKLBQ9ULI2 386 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 VPS9D1Q9Y2B5 631 aa8.67□□□□□ -1.02
SNCA-201ENST00000336904 KNL1Q8NG31 2342 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 TMX2-CTNND1H3BSU7 103 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 GFRA2O00451 464 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 CTSLP07711 333 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 RHOP08100 348 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 FAM58BPP0C7Q3 252 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 PRR35P0CG20 571 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 MYCLP1P12525 358 aaPredicted RBP8.66□□□□□ -1.02
SNCA-201ENST00000336904 HOXB8P17481 243 aaPredicted RBP8.66□□□□□ -1.02
SNCA-201ENST00000336904 EPORP19235 508 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 DGKAP23743 735 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 PSMA4P25789 261 aaKnown RBP8.66□□□□□ -1.02
SNCA-201ENST00000336904 PRKG2Q13237 762 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 PTCHD3Q3KNS1 767 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 TXNDC11Q6PKC3 985 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 HTR3DQ70Z44 454 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 STK40Q8N2I9 435 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 FIBINQ8TAL6 211 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 ELMO1Q92556 727 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 ACDQ96AP0 544 aa8.66□□□□□ -1.02
SNCA-201ENST00000336904 ROPN1LQ96C74 230 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms