RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 ENO2P09104 434 aaPredicted RBP14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 C1SP09871 688 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 LINC00271P0C7V0 271 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 GSTT1P30711 240 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 EEFSECP57772 596 aaKnown RBP14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 PPP4R4Q6NUP7 873 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 CARM1Q86X55 608 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 HID1Q8IV36 788 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 DPP10Q8N608 796 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 SKA2Q8WVK7 121 aaPredicted RBP14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 ISG20Q96AZ6 181 aaKnown RBP14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 MCCC1Q96RQ3 725 aaPredicted RBP14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 GRIP2Q9C0E4 1043 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 RPF2Q9H7B2 306 aaKnown RBP14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 KCTD5Q9NXV2 234 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 ZNHIT2Q9UHR6 403 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 SLC25A13Q9UJS0 675 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 ZBBXA8MT70 800 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 HIDE1A8MVS5 230 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 GRM6O15303 877 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 ULK1O75385 1050 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 MTX2O75431 263 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 RFPL2O75678 378 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 EPB42P16452 691 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 HRH2P25021 359 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 FASP25445 335 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 TXNL4AP83876 142 aaKnown RBP14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 PLOD1Q02809 727 aaPredicted RBP14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 HSPA14Q0VDF9 509 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 SPATS1Q496A3 300 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 SLC44A4Q53GD3 710 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 CARD16Q5EG05 197 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 SLC30A9Q6PML9 568 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 UBTD2Q8WUN7 234 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 MTFMTQ96DP5 389 aaKnown RBP14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 PPP3R2Q96LZ3 170 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 BBS2Q9BXC9 721 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 ARL15Q9NXU5 204 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 TMPRSS11EQ9UL52 423 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 ZNF490Q9ULM2 529 aaPredicted RBP14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 KRT87PA6NCN2 255 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 RGS14O43566 566 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 STK16O75716 305 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 GPIP06744 558 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 JAK1P23458 1154 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 VARSP26640 1264 aaKnown RBP14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 RPL5P46777 297 aaKnown RBP14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 RPIAP49247 311 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 TEAD2Q15562 447 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 NHSL2Q5HYW2 709 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 NAIF1Q69YI7 327 aaPredicted RBP14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 GPR65Q8IYL9 337 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 TRPV3Q8NET8 790 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 ULK4Q96C45 1275 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 LINC00597Q9H2U6 94 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 RDH14Q9HBH5 336 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 OAZ3Q9UMX2 235 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 PDE10AQ9Y233 779 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 PPIL1Q9Y3C6 166 aa14.56□□□□□ -0.08
CLCNKA-201ENST00000331433 POP4O95707 220 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 GGT5P36269 586 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 ERVFC1P60507 584 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 CPSF6Q16630 551 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 ZXDCQ2QGD7 858 aaPredicted RBP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 VRK3Q8IV63 474 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 RGL4Q8IZJ4 473 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 GOLM1Q8NBJ4 401 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 PAWRQ96IZ0 340 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 SEPHS2Q99611 448 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 CGREF1Q99674 301 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 TCF25Q9BQ70 676 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 NTMT1Q9BV86 223 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 MRPS26Q9BYN8 205 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 CPEB1Q9BZB8 566 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 TMEM45AQ9NWC5 275 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 NEUROG3Q9Y4Z2 214 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 HELZP42694 1942 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 MANBAO00462 879 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 DLGAP1O14490 977 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 ANXA5P08758 320 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 PABPC1P11940 636 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 EPORP19235 508 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 MSH3P20585 1137 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 SPINT3P49223 89 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 CCT8P50990 548 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 PTPN5P54829 565 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 KIAA0040Q15053 153 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 IMPG1Q17R60 797 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 FAM174BQ3ZCQ3 159 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 NADK2Q4G0N4 442 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 GALNT15Q8N3T1 639 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 LIX1Q8N485 282 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 KRTCAP2Q8N6L1 136 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 CLHC1Q8NHS4 586 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 SORCS1Q8WY21 1168 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 BIRC7Q96CA5 298 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 CENPNQ96H22 339 aaPredicted RBP14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 BEGAINQ9BUH8 593 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 MUC13Q9H3R2 512 aa14.55□□□□□ -0.08
CLCNKA-201ENST00000331433 C5orf42Q9H799 3197 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms