RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 CDC14AQ9UNH5 594 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 RBM47A0AV96 593 aaKnown RBP14.49□□□□□ -0.09
TCOF1-201ENST00000323668 PGRP06401 933 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 CKBP12277 381 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 FLT3LGP49771 235 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 CHIT1Q13231 466 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 MEP1AQ16819 746 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 UPP1Q16831 310 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 SETMARQ53H47 684 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-201ENST00000323668 C11orf65Q8NCR3 313 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 AIG1Q9NVV5 245 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 LOC100130705A0A1B0GUX0 176 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 TNFRSF11BO00300 401 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 FMO3P31513 532 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 ASMTP46597 345 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 KCNQ1P51787 676 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 AKAP14Q86UN6 197 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 L3HYPDHQ96EM0 354 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 DEPDC7Q96QD5 511 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 SMURF2Q9HAU4 748 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 MRPL17Q9NRX2 175 aaKnown RBP14.49□□□□□ -0.09
TCOF1-201ENST00000323668 CITO14578 2027 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 NRAPQ86VF7 1730 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 ILVBLA1L0T0 632 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 KPNA3O00505 521 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-201ENST00000323668 EPORP19235 508 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 SRSF11Q05519 484 aaKnown RBP14.49□□□□□ -0.09
TCOF1-201ENST00000323668 LRP8Q14114 963 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 CYP2A13Q16696 494 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 COQ5Q5HYK3 327 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 ATG14Q6ZNE5 492 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 CYP4Z2PQ8N1L4 340 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 KCNJ9Q92806 393 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 UBE2E3Q969T4 207 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 MYRFLQ96LU7 910 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 CCSER2Q9H7U1 834 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 EBF1Q9UH73 591 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 RAB23Q9ULC3 237 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 MAGEB17A8MXT2 336 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 CNMDO75829 334 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 MYF6P23409 242 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 HLCSP50747 726 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 TMBIM6P55061 237 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 DGKKQ5KSL6 1271 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 SPANXN4Q5MJ08 99 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 ATXN7L2Q5T6C5 722 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 KLHL35Q6PF15 583 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 PNPLA1Q8N8W4 532 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 RDH12Q96NR8 316 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 GSTO2Q9H4Y5 243 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 TRMT13Q9NUP7 481 aaKnown RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 TMEM181Q9P2C4 612 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 Q9Y3F1 56 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 PRKAR2AP13861 404 aaKnown RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 CAPN3P20807 821 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 CSNK2BP67870 215 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 LAPTM5Q13571 262 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 AGMOQ6ZNB7 445 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 PTCHD4Q6ZW05 846 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 UBASH3BQ8TF42 649 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 ZNF382Q96SR6 550 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 NLE1Q9NVX2 485 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 STMN3Q9NZ72 180 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 ANKDD1BA6NHY2 528 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 PLK4O00444 970 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 PER2O15055 1255 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 ELK4P28324 431 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 NSG1P42857 185 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 BORAQ6PGQ7 559 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 MAMDC4Q6UXC1 1216 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 CYP4V2Q6ZWL3 525 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 GOLGA7Q7Z5G4 137 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 OR4A15Q8NGL6 344 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 TUBA1CQ9BQE3 449 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 COPS4Q9BT78 406 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 NSUN3Q9H649 340 aaKnown RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 SGK2Q9HBY8 427 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 KLHL28Q9NXS3 571 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 KIAA1522Q9P206 1035 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 IQCF5A8MTL0 148 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 FDXRP22570 491 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 PRKACGP22612 351 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 GRK3P35626 688 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 TALDO1P37837 337 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 ATN1P54259 1190 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 SNX20Q7Z614 316 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 SYVN1Q86TM6 617 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 NAT16Q8N8M0 369 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 INTS7Q9NVH2 962 aaKnown RBP14.48□□□□□ -0.09
TCOF1-201ENST00000323668 ADAM30Q9UKF2 790 aa14.48□□□□□ -0.09
TCOF1-201ENST00000323668 SLC38A8A6NNN8 435 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 MEIS3P2A8K0S8 358 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 LOC110117498-PIK3R3F6TDL0 507 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 ADAMDEC1O15204 470 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 FOXD2O60548 495 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 CREG1O75629 220 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 KCNA5P22460 613 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 INHBCP55103 352 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 ITGA1P56199 1179 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 GK3PQ14409 553 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms