RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GNPDA1P46926 289 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 ATN1P54259 1190 aaPredicted RBP21.93■■□□□ 1.1
PNKP-201ENST00000322344 CREMQ03060 361 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 CACHD1Q5VU97 1274 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 BBS7Q8IWZ6 715 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 LEMD2Q8NC56 503 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 SLC13A3Q8WWT9 602 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 CCDC115Q96NT0 180 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 CHID1Q9BWS9 393 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 SMPD3Q9NY59 655 aaPredicted RBP21.93■■□□□ 1.1
PNKP-201ENST00000322344 SCN8AQ9UQD0 1980 aa21.93■■□□□ 1.1
PNKP-201ENST00000322344 TRIM64CA6NLI5 447 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 ANXA6P08133 673 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 CYP4F8P98187 520 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 DGKKQ5KSL6 1271 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 TTC33Q6PID6 262 aaPredicted RBP21.92■■□□□ 1.1
PNKP-201ENST00000322344 CRTC1Q6UUV9 634 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 AUTS2Q8WXX7 1259 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 ULK4Q96C45 1275 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 PPIL1Q9Y3C6 166 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 EI24O14681 340 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 STK16O75716 305 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 RSL1D1O76021 490 aaKnown RBP21.92■■□□□ 1.1
PNKP-201ENST00000322344 IL6P05231 212 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 ANXA5P08758 320 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 NELFEP18615 380 aaKnown RBP21.92■■□□□ 1.1
PNKP-201ENST00000322344 GGT1P19440 569 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 CD70P32970 193 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 CAPGP40121 348 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 RPS9P46781 194 aaKnown RBP21.92■■□□□ 1.1
PNKP-201ENST00000322344 DGKQP52824 942 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 IMPG1Q17R60 797 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 C11orf91Q3C1V1 193 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 TMEM259Q4ZIN3 620 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 USP45Q70EL2 814 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 RALGPS2Q86X27 583 aaPredicted RBP21.92■■□□□ 1.1
PNKP-201ENST00000322344 ZSWIM9Q86XI8 627 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 RIMKLAQ8IXN7 391 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 DHRSXQ8N5I4 330 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 TTC16Q8NEE8 873 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 SCRN2Q96FV2 425 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 DPY30Q9C005 99 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 PAK6Q9NQU5 681 aaPredicted RBP21.92■■□□□ 1.1
PNKP-201ENST00000322344 KLQ9UEF7 1012 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 USP22Q9UPT9 525 aa21.92■■□□□ 1.1
PNKP-201ENST00000322344 NPIPB15A6NHN6 443 aaPredicted RBP21.91■■□□□ 1.1
PNKP-201ENST00000322344 MANBAO00462 879 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 CDH2P19022 906 aaPredicted RBP21.91■■□□□ 1.1
PNKP-201ENST00000322344 GDF5P43026 501 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 MTPNP58546 118 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 ZDHHC20Q5W0Z9 365 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 AP1ARQ63HQ0 302 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 TSPAN33Q86UF1 283 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 DTWD1Q8N5C7 304 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 GPR26Q8NDV2 337 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 USP7Q93009 1102 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 ECHDC3Q96DC8 303 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 ASIC4Q96FT7 647 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 RNF145Q96MT1 663 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 TOX2Q96NM4 488 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 DEFB118Q96PH6 123 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 SEPHS2Q99611 448 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 COPS8Q99627 209 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 SH3GL1Q99961 368 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 LRTM1Q9HBL6 345 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 RSL24D1Q9UHA3 163 aaKnown RBP21.91■■□□□ 1.1
PNKP-201ENST00000322344 OGDHLQ9ULD0 1010 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 ZNF490Q9ULM2 529 aaPredicted RBP21.91■■□□□ 1.1
PNKP-201ENST00000322344 CLEC4EQ9ULY5 219 aa21.91■■□□□ 1.1
PNKP-201ENST00000322344 TRAV19A0A0A6YYK7 116 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 TRIM64A6NGJ6 449 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 FFAR3O14843 346 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 TEX28O15482 410 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 CLOCKO15516 846 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 GPR42O15529 346 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 SRCP12931 536 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 SELPLGQ14242 412 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 SLC39A5Q6ZMH5 540 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 GAREM2Q75VX8 874 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 TCAIMQ8N3R3 496 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 ITFG1Q8TB96 612 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 DTNBP1Q96EV8 351 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 RC3H2Q9HBD1 1191 aaKnown RBP21.9■■□□□ 1.1
PNKP-201ENST00000322344 INTS6Q9UL03 887 aaKnown RBP21.9■■□□□ 1.1
PNKP-201ENST00000322344 FADS3Q9Y5Q0 445 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 OBSL1O75147 1896 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 LOC730098B7Z3J9 87 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 H3BSA7 217 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 DEAF1O75398 565 aaPredicted RBP21.9■■□□□ 1.1
PNKP-201ENST00000322344 KRT6AP02538 564 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 KRT6BP04259 564 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 RAP2AP10114 183 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 CHRM1P11229 460 aaPredicted RBP21.9■■□□□ 1.1
PNKP-201ENST00000322344 PCSK2P16519 638 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 KRT6CP48668 564 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 MAPKAPK3Q16644 382 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 FAM98BQ52LJ0 330 aaKnown RBP21.9■■□□□ 1.1
PNKP-201ENST00000322344 FKBP9P1Q75LS8 142 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 ZNF786Q8N393 782 aa21.9■■□□□ 1.1
PNKP-201ENST00000322344 DNAJB8Q8NHS0 232 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms