RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 MED25Q71SY5 747 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 ZC3H18Q86VM9 953 aaKnown RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 TMEM139Q8IV31 216 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 TMEM102Q8N9M5 508 aaPredicted RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 FDCSPQ8NFU4 85 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 OR1L3Q8NH93 324 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 HM13Q8TCT9 377 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 SSC4DQ8WTU2 575 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 FSD1LQ9BXM9 530 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 PITPNM3Q9BZ71 974 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 GBA3Q9H227 469 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 ASB8Q9H765 288 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 FANCEQ9HB96 536 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 SOHLH2Q9NX45 425 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 SNX7Q9UNH6 387 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 ARL5AQ9Y689 179 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 DUSP10Q9Y6W6 482 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 HIVEP3Q5T1R4 2406 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 F5H423 210 aaPredicted RBP13.81□□□□□ -0.2
RPP40-201ENST00000319533 DPM1O60762 260 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 SEMA7AO75326 666 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 ANXA9O76027 345 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 CDH3P22223 829 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 VARSP26640 1264 aaKnown RBP13.81□□□□□ -0.2
RPP40-201ENST00000319533 PRDX3P30048 256 aaKnown RBP13.81□□□□□ -0.2
RPP40-201ENST00000319533 CETN2P41208 172 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 ARCN1P48444 511 aaKnown RBP13.81□□□□□ -0.2
RPP40-201ENST00000319533 MARCKSL1P49006 195 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 GEMP55040 296 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 ITGA1P56199 1179 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 COPS2P61201 443 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 PRKAA1Q13131 559 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 LLGL1Q15334 1064 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 CCDC181Q5TID7 509 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 CFAP206Q8IYR0 622 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 SYCE1Q8N0S2 351 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 ZBTB2Q8N680 514 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 LILRA3Q8N6C8 439 aaPredicted RBP13.81□□□□□ -0.2
RPP40-201ENST00000319533 OR4E2Q8NGC2 313 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 OR4K2Q8NGD2 314 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 HEXDCQ8WVB3 486 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 KRT35Q92764 455 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 SMAD5Q99717 465 aaKnown RBP13.81□□□□□ -0.2
RPP40-201ENST00000319533 DPH2Q9BQC3 489 aaPredicted RBP13.81□□□□□ -0.2
RPP40-201ENST00000319533 DESI2Q9BSY9 194 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 NUDT9Q9BW91 350 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 LACRTQ9GZZ8 138 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 TFB2MQ9H5Q4 396 aaKnown RBP13.81□□□□□ -0.2
RPP40-201ENST00000319533 RSPH14Q9UHP6 348 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 FKBPLQ9UIM3 349 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 DOPEY1Q5JWR5 2465 aa13.81□□□□□ -0.2
RPP40-201ENST00000319533 MYO9AB2RTY4 2548 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 CCDC66A2RUB6 948 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 POLBP06746 335 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 RNF224P0DH78 156 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 RWDD2BP57060 319 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 ZNF385CQ66K41 422 aaPredicted RBP13.8□□□□□ -0.2
RPP40-201ENST00000319533 HIST2H2BCQ6DN03 193 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 BBS12Q6ZW61 710 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 SYTL1Q8IYJ3 562 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 RBMXL3Q8N7X1 1067 aaKnown RBP13.8□□□□□ -0.2
RPP40-201ENST00000319533 NAT14Q8WUY8 206 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 LCN9Q8WX39 176 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 PNPLA2Q96AD5 504 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 ULK4Q96C45 1275 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 CLIP3Q96DZ5 547 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 FICDQ9BVA6 458 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 OR52A5Q9H2C5 316 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 KCNF1Q9H3M0 494 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 SRMSQ9H3Y6 488 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 ACTR5Q9H9F9 607 aaPredicted RBP13.8□□□□□ -0.2
RPP40-201ENST00000319533 C5AR2Q9P296 337 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 PCDHA3Q9Y5H8 950 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 PCSK5Q92824 1860 aa13.8□□□□□ -0.2
RPP40-201ENST00000319533 IGLV3-16A0A075B6K0 115 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 MACROD2A1Z1Q3 448 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 GRID2IPA4D2P6 1211 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 TCP11X1B4DZS4 312 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 TMEM150CB9EJG8 249 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 H3BMH7 237 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 APOC4-APOC2K7ER74 178 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 BTN3A3O00478 584 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 BTN3A1O00481 513 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 DDAH2O95865 285 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 APOC2P02655 101 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 RALBP11234 206 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 ST6GAL1P15907 406 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 CTNNA2P26232 953 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 RBL1P28749 1068 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 PREPP48147 710 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 CD151P48509 253 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 ZNF140P52738 457 aaPredicted RBP13.79□□□□□ -0.2
RPP40-201ENST00000319533 RRADP55042 308 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 KRT33BQ14525 404 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 NCF4Q15080 339 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 SLC6A19Q695T7 634 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 PEX26Q7Z412 305 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 KLHDC8BQ8IXV7 354 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms