RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 FAM50BQ9Y247 325 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 PRELID1Q9Y255 219 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
CPNE1-201ENST00000317677 GIPC1O14908 333 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 GRID2O43424 1007 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 NDUFS3O75489 264 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 SRP72O76094 671 aaKnown RBP12.83□□□□□ -0.35
CPNE1-201ENST00000317677 RHOBTB1O94844 696 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 BPIP17213 487 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 LHCGRP22888 699 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 SLC9B1Q4ZJI4 515 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 FAM151BQ6UXP7 276 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 RFLNAQ6ZTI6 216 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 FRMD7Q6ZUT3 714 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 PCDH20Q8N6Y1 951 aaKnown RBP12.83□□□□□ -0.35
CPNE1-201ENST00000317677 OR2A12Q8NGT7 310 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 HLA-CQ95604 372 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 LYSMD1Q96S90 227 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 GPR21Q99679 349 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 TUBA1CQ9BQE3 449 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 CPEB1Q9BZB8 566 aaKnown RBP12.83□□□□□ -0.35
CPNE1-201ENST00000317677 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 ZDHHC6Q9H6R6 413 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 ITM2BQ9Y287 266 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 PPIL1Q9Y3C6 166 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 PKP3Q9Y446 797 aa12.83□□□□□ -0.35
CPNE1-201ENST00000317677 OAS3Q9Y6K5 1087 aaKnown RBP12.83□□□□□ -0.35
CPNE1-201ENST00000317677 UNC80Q8N2C7 3258 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-201ENST00000317677 FOXD2O60548 495 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-201ENST00000317677 TSPAN12O95859 305 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 CHEK2O96017 543 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 JUNP05412 331 aaKnown RBP12.83□□□□□ -0.36
CPNE1-201ENST00000317677 UGT2B4P06133 528 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 RBP1P09455 135 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 COX4I1P13073 169 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 PKMP14618 531 aaKnown RBP12.83□□□□□ -0.36
CPNE1-201ENST00000317677 ARSAP15289 507 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 HOXB8P17481 243 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-201ENST00000317677 TCEA1P23193 301 aaKnown RBP12.83□□□□□ -0.36
CPNE1-201ENST00000317677 WEE1P30291 646 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 KPNA2P52292 529 aaKnown RBP12.83□□□□□ -0.36
CPNE1-201ENST00000317677 CACNG1Q06432 222 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 ITGADQ13349 1161 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 LRRC73Q5JTD7 316 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 FAAH2Q6GMR7 532 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 KRT80Q6KB66 452 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 EPGNQ6UW88 154 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 C16orf89Q6UX73 402 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 LINC00299Q6ZSB3 139 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 CELF5Q8N6W0 485 aaKnown RBP12.83□□□□□ -0.36
CPNE1-201ENST00000317677 TNIP2Q8NFZ5 429 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 ZFYVE19Q96K21 471 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 ALPK1Q96QP1 1244 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 ATOH8Q96SQ7 321 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 APOL5Q9BWW9 433 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 COG4Q9H9E3 785 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 IL26Q9NPH9 171 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 ZMYM5Q9UJ78 669 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 CDC14AQ9UNH5 594 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 RAP2CQ9Y3L5 183 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 KIAA1549LQ6ZVL6 1849 aa12.83□□□□□ -0.36
CPNE1-201ENST00000317677 IQCF5A8MTL0 148 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 TMEM233B4DJY2 109 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 WASH3PC4AMC7 463 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 NPHS1O60500 1241 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 BCAS2O75934 225 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-201ENST00000317677 IPO13O94829 963 aaKnown RBP12.82□□□□□ -0.36
CPNE1-201ENST00000317677 KRT75O95678 551 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 CHRNB1P11230 501 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 MTHFD2P13995 350 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 TTPAP49638 278 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 SELENBP1Q13228 472 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 FLOT2Q14254 428 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 DMC1Q14565 340 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 SLX4IPQ5VYV7 408 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 CCNYL1Q8N7R7 359 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 SPERTQ8NA61 448 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 KDM1BQ8NB78 822 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 SIDT2Q8NBJ9 832 aaKnown RBP12.82□□□□□ -0.36
CPNE1-201ENST00000317677 CD200R1Q8TD46 325 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 OSCP1Q8WVF1 389 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 ASB16Q96NS5 453 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 MCCC1Q96RQ3 725 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-201ENST00000317677 ZNF347Q96SE7 839 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 BOCQ9BWV1 1114 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 NPLQ9BXD5 320 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-201ENST00000317677 DUS2Q9NX74 493 aaKnown RBP12.82□□□□□ -0.36
CPNE1-201ENST00000317677 DPP7Q9UHL4 492 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 SATB2Q9UPW6 733 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 CORINQ9Y5Q5 1042 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 PRUNE2Q8WUY3 3088 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 DOCK8Q8NF50 2099 aa12.82□□□□□ -0.36
CPNE1-201ENST00000317677 TRBV5-4A0A0C4DH59 114 aa12.81□□□□□ -0.36
CPNE1-201ENST00000317677 A0A1W2PPW3 197 aa12.81□□□□□ -0.36
CPNE1-201ENST00000317677 PRAMEF1O95521 474 aa12.81□□□□□ -0.36
CPNE1-201ENST00000317677 HNRNPLP14866 589 aaKnown RBP eCLIP12.81□□□□□ -0.362e-8■□□□□ 10.1
CPNE1-201ENST00000317677 RCVRNP35243 200 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms