RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 CHST12Q9NRB3 414 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF222Q9UK12 451 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ATF5Q9Y2D1 282 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 NAALAD2Q9Y3Q0 740 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 CPQQ9Y646 472 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 A0A1W2PQ67 120 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 KRBA1A5PL33 1030 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ZSCAN5BA6NJL1 495 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 FAM155AB1AL88 458 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 NT5C1B-RDH14C9J2C7 533 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 STX16O14662 325 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TBX1O43435 398 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ENTPD6O75354 484 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ITGAMP11215 1152 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 CD36P16671 472 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 EFNA1P20827 205 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF10P21506 573 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 GPR15P49685 360 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 APOFQ13790 326 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 IL18Q14116 193 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 DLG2Q15700 870 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 FAM198BQ6UWH4 519 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 OTOP1Q7RTM1 612 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SCUBE3Q8IX30 993 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SVBPQ8N300 66 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 METTL25Q8N6Q8 603 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 MARVELD3Q96A59 401 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 DHRS9Q9BPW9 319 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 GBA3Q9H227 469 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF334Q9HCZ1 680 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SNTG2Q9NY99 539 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 DDX60LQ5H9U9 1706 aaKnown RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 USP9YO00507 2555 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 GPR179Q6PRD1 2367 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 FABP12A6NFH5 140 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 PER2O15055 1255 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 NOS2P35228 1153 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 NIPAL4Q0D2K0 466 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 GAS6Q14393 721 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ECM1Q16610 540 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ESCO2Q56NI9 601 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 MPP7Q5T2T1 576 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 CCSAPQ6IQ19 270 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TATDN1Q6P1N9 297 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 LAYNQ6UX15 382 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 GPSM1Q86YR5 675 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 VRK1Q99986 396 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SEZ6LQ9BYH1 1024 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 RDH8Q9NYR8 311 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 DOLKQ9UPQ8 538 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 IRF6O14896 467 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ARPC2O15144 300 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 BET1O15155 118 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SLC7A4O43246 635 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TIPRLO75663 272 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 MTHFD1P11586 935 aaKnown RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 IL1RNP18510 177 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 CSTF2P33240 577 aaKnown RBP eCLIP4.45□□□□□ -1.71e-7■□□□□ 9
CNOT1-201ENST00000317147 SMARCB1Q12824 385 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 FASTKD3Q14CZ7 662 aaKnown RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SWI5Q1ZZU3 235 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 LLGL2Q6P1M3 1020 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 RHEBL1Q8TAI7 183 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SLC2A14Q8TDB8 520 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 KCTD4Q8WVF5 259 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TMEM246Q9BRR3 403 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 CBWD1Q9BRT8 395 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 NTPCRQ9BSD7 190 aaKnown RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 MECRQ9BV79 373 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 C1QTNF1Q9BXJ1 281 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 FGFBP2Q9BYJ0 223 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TRIM2Q9C040 744 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 LIN7BQ9HAP6 207 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TMEM138Q9NPI0 162 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 PAK1IP1Q9NWT1 392 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 CNTN3Q9P232 1028 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 DAGLAQ9Y4D2 1042 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TCF20Q9UGU0 1960 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 KANTRA0A1W2PQU2 76 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 H3BN98 237 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 STX16-NPEPL1H3BU86 382 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 UGT2B17O75795 530 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 EGFRP00533 1210 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CSH1P0DML2 217 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CSH2P0DML3 217 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 DBTP11182 482 aaKnown RBP4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ODC1P11926 461 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 SLC6A2P23975 617 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 KLRK1P26718 216 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 HTR1EP28566 365 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 UGT2B10P36537 528 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 MATKP42679 507 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 KIR3DL1P43629 444 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 BMPR2Q13873 1038 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 RHEBQ15382 184 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 GOLGA7BQ2TAP0 167 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 TBRG1Q3YBR2 411 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 CDNFQ49AH0 187 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 DCAF12L1Q5VU92 463 aa4.44□□□□□ -1.7
CNOT1-201ENST00000317147 ZBTB33Q86T24 672 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms