RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 PIK3R6Q5UE93 754 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 AFMIDQ63HM1 303 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 EFL1Q7Z2Z2 1120 aaKnown RBP16.04■□□□□ 0.16
CACFD1-202ENST00000316948 SCD5Q86SK9 330 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 LYSMD2Q8IV50 215 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 ADHFE1Q8IWW8 467 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 PHACTR4Q8IZ21 702 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 ZNF540Q8NDQ6 660 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 OR56A4Q8NGH8 313 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 OR4L1Q8NH43 312 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 METTL6Q8TCB7 284 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 BRI3BPQ8WY22 251 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 ZHX1-C8orf76Q96EF9 292 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 HOXD1Q9GZZ0 328 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 SYTL2Q9HCH5 934 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 CD274Q9NZQ7 290 aa16.04■□□□□ 0.16
CACFD1-202ENST00000316948 TMEFF2Q9UIK5 374 aaPredicted RBP16.04■□□□□ 0.16
CACFD1-202ENST00000316948 CXCR6O00574 342 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 NUAK1O60285 661 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 RFPL2O75678 378 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 KCNK2O95069 426 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 ATXN1LP0C7T5 689 aaKnown RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 ODC1P11926 461 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 EIF2DP41214 584 aaKnown RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 SUOXP51687 545 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 ERVPABLB-1P60509 514 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 VARS2Q5ST30 1063 aaKnown RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 GCNT7Q6ZNI0 430 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 OR5K1Q8NHB7 308 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 TRIB2Q92519 343 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 MS4A4AQ96JQ5 239 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 BARD1Q99728 777 aaKnown RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 ACBD6Q9BR61 282 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 DERL2Q9GZP9 239 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 C6orf62Q9GZU0 229 aaPredicted RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 TRIT1Q9H3H1 467 aaKnown RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 GORASP2Q9H8Y8 452 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 MARCH7Q9H992 704 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 TAS2R13Q9NYV9 303 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 FLRT1Q9NZU1 646 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 MKI67P46013 3256 aaKnown RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 UPK1BO75841 260 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 EIF2S1P05198 315 aaKnown RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 CAPN1P07384 714 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 GTF2E2P29084 291 aaKnown RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 CYP4F3Q08477 520 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 RFTN2Q52LD8 501 aaPredicted RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 SETMARQ53H47 684 aaPredicted RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 LDLRAD1Q5T700 205 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 SDHAF4Q5VUM1 108 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 STEAP3Q658P3 488 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 LETMD1Q6P1Q0 360 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 SLC22A15Q8IZD6 547 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 FAM83FQ8NEG4 500 aaPredicted RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 ZNF548Q8NEK5 533 aaPredicted RBP16.03■□□□□ 0.16
CACFD1-202ENST00000316948 RHBDF1Q96CC6 855 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 CPNE5Q9HCH3 593 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 OSER1Q9NX31 292 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 NEUROG3Q9Y4Z2 214 aa16.03■□□□□ 0.16
CACFD1-202ENST00000316948 A0A1W2PQH9 124 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 H0Y626 953 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 ARVCFO00192 962 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 TRIM16O95361 564 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 NDST3O95803 873 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 CNPP09543 421 aaKnown RBP16.02■□□□□ 0.16
CACFD1-202ENST00000316948 OR4Q2P0C623 313 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 CD36P16671 472 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 IGFBP5P24593 272 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 RYKP34925 604 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 STC1P52823 247 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 PTGR1Q14914 329 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 AP5B1Q2VPB7 878 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 C18orf21Q32NC0 220 aaPredicted RBP16.02■□□□□ 0.16
CACFD1-202ENST00000316948 ALFQ53S48 1182 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 LINC00299Q6ZSB3 139 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 LRRC8DQ7L1W4 858 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 PGBD5Q8N414 524 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 ATP6V0D2Q8N8Y2 350 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 ZNF486Q96H40 463 aaPredicted RBP16.02■□□□□ 0.16
CACFD1-202ENST00000316948 MYOCQ99972 504 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 TPRKBQ9Y3C4 175 aa16.02■□□□□ 0.16
CACFD1-202ENST00000316948 ELOVL7A1L3X0 281 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 EFCAB9A8MZ26 197 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 RPP40O75818 363 aaKnown RBP16.02■□□□□ 0.15
CACFD1-202ENST00000316948 ITGB1P05556 798 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 LCKP06239 509 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 GRK3P35626 688 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 BMPR1AP36894 532 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 MRPL19P49406 292 aaKnown RBP16.02■□□□□ 0.15
CACFD1-202ENST00000316948 CLK1P49759 484 aaKnown RBP16.02■□□□□ 0.15
CACFD1-202ENST00000316948 COPZ1P61923 177 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 PON2Q15165 354 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 SYT16Q17RD7 645 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 GTDC1Q4AE62 458 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 METTL23Q86XA0 190 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 MICU2Q8IYU8 434 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 TXNDC15Q96J42 360 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 SEMA3CQ99985 751 aa16.02■□□□□ 0.15
CACFD1-202ENST00000316948 ZBTB20Q9HC78 741 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms