RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MARVELD3Q96A59 401 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 GAD1Q99259 594 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 KCNH6Q9H252 994 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 QPCTLQ9NXS2 382 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 PHF11Q9UIL8 331 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 MOXD2PA6NHM9 499 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 LRRC37AA6NMS7 1700 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 FADS2P1A8MWK0 482 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 C9JVG2 144 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 SLC28A1O00337 649 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 PPEF2O14830 753 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 MPZL2O60487 215 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 PKMP14618 531 aaKnown RBP4.7□□□□□ -1.66
PTPN13-201ENST00000316707 IST1P53990 364 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 ITKQ08881 620 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 PCBP2Q15366 365 aaKnown RBP eCLIP4.7□□□□□ -1.66
PTPN13-201ENST00000316707 CTU2Q2VPK5 515 aaKnown RBP4.7□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF789Q5FWF6 425 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 TMEM132CQ8N3T6 1108 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 STX19Q8N4C7 294 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 ATG16L2Q8NAA4 619 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 TBATAQ96M53 351 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 EMILIN2Q9BXX0 1053 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 SP110Q9HB58 689 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 ABCC13Q9NSE7 274 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 CATSPERZQ9NTU4 200 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 ULK1O75385 1050 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ECI2O75521 394 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SLITRK5O94991 958 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ZBTB7AO95365 584 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ESR1P03372 595 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 IQCF3P0C7M6 154 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TSPAN8P19075 237 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 MAGEA11P43364 429 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 MTPNP58546 118 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CCNJQ5T5M9 372 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 DESI1Q6ICB0 168 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 HFE2Q6ZVN8 426 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 OR10A6Q8NH74 314 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 NDNFQ8TB73 568 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PTERQ96BW5 349 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PYURFQ96I23 114 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 FCRL2Q96LA5 508 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 C1orf74Q96LT6 269 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PGLYRP2Q96PD5 576 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SLC29A3Q9BZD2 475 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SMOC2Q9H3U7 446 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TMEFF2Q9UIK5 374 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 STOML2Q9UJZ1 356 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 MAN2B2Q9Y2E5 1009 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TIMM22Q9Y584 194 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 STRCP1A6NGW2 1772 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 STRCQ7RTU9 1775 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 EFCAB10A6NFE3 127 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 MROH6A6NGR9 719 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 H3BRB1 525 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 BTN3A1O00481 513 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 FADS2O95864 444 aaKnown RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 GJB1P08034 283 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 F7P08709 466 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 DARSP14868 501 aaKnown RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PKLRP30613 574 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 IL12RB1P42701 662 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 RGS4P49798 205 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 C10orf62Q5T681 223 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 LAIR2Q6ISS4 152 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 IL27RAQ6UWB1 636 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 Q6ZSR9 355 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ZDHHC21Q8IVQ6 265 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CACTIN-AS1Q8N1I8 211 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 GTF2H4Q92759 462 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SMOQ99835 787 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SLC30A2Q9BRI3 323 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SLC39A8Q9C0K1 460 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 POLR1EQ9GZS1 481 aaKnown RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 ATXN3LQ9H3M9 355 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CD274Q9NZQ7 290 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 KIF17Q9P2E2 1029 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 KLQ9UEF7 1012 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CLCA1A8K7I4 914 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 NOBOXO60393 691 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TCF3P15923 654 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CXCR2P25025 360 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PIGAP37287 484 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 PIK3CBP42338 1070 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 CHRNA4P43681 627 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TTPAP49638 278 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 FOXA1P55317 472 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TSNQ15631 228 aaKnown RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 TIGD6Q17RP2 521 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SIGIRRQ6IA17 410 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 VASH1Q7L8A9 365 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 B3GNT8Q7Z7M8 397 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 SYVN1Q86TM6 617 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 GPSM1Q86YR5 675 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 IL17RDQ8NFM7 739 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 GTF3C2Q8WUA4 911 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-201ENST00000316707 KLRG1Q96E93 195 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 HRASLS5Q96KN8 279 aa4.69□□□□□ -1.66
PTPN13-201ENST00000316707 HTATIP2Q9BUP3 242 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms