RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PDGFRLQ15198 375 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 CDKL4Q5MAI5 379 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 VITQ6UXI7 678 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 KBTBD2Q8IY47 623 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 RASGEF1AQ8N9B8 481 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 TMIEQ8NEW7 156 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 BHLHE22Q8NFJ8 381 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-201ENST00000315286 OR8D1Q8WZ84 308 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 GLYATL1Q969I3 302 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 VPS35Q96QK1 796 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 NTMT1Q9BV86 223 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 LMAN2LQ9H0V9 348 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 IL1RL2Q9HB29 575 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 OBP2AQ9NY56 170 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 TMEM181Q9P2C4 612 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 COQ6Q9Y2Z9 468 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 MUC22E2RYF6 1773 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-201ENST00000315286 TMEM202A6NGA9 273 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 GFYI3L273 518 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 RFXAPO00287 272 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 PLK4O00444 970 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 FFAR3O14843 346 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 GPR42O15529 346 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 ENO2P09104 434 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 ATP6V1C1P21283 382 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 GGT5P36269 586 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 PPP2R2DQ66LE6 453 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 TERB1Q8NA31 727 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 FAM129BQ96TA1 746 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 TRIM54Q9BYV2 358 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 TMEM245Q9H330 911 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 SLC32A1Q9H598 525 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 ZDHHC4Q9NPG8 344 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 FAM8A1Q9UBU6 413 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 CD300AQ9UGN4 299 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 CCL27Q9Y4X3 112 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 KIF26AQ9ULI4 1882 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 KRT87PA6NCN2 255 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 TBC1D3BA6NDS4 549 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 LSM1O15116 133 aaKnown RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 INPP4BO15327 924 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 SLC22A3O75751 556 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 FTH1P02794 183 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 HIST1H2AGP0C0S8 130 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 EBLN1P0CF75 366 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 EPORP19235 508 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 HIST1H2ADP20671 130 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 ITGB7P26010 798 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 CTSCP53634 463 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 CDKL1Q00532 357 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 TRIM25Q14258 630 aaKnown RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 NR6A1Q15406 480 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 PDCD4Q53EL6 469 aaKnown RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 LDLRAP1Q5SW96 308 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 FBXL19Q6PCT2 694 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 RAVER1Q8IY67 606 aaKnown RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 NRSN1Q8IZ57 195 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 CHCHD4Q8N4Q1 142 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 ASZ1Q8WWH4 475 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 SPDL1Q96EA4 605 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 HIST1H2AHQ96KK5 128 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 COQ10AQ96MF6 247 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 HIST1H2AJQ99878 128 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 P2RY13Q9BPV8 354 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 GPATCH1Q9BRR8 931 aaKnown RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 H2AFJQ9BTM1 129 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 PCDHAC1Q9H158 963 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 ZFP14Q9HCL3 533 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 FARSBQ9NSD9 589 aaKnown RBP17.97■□□□□ 0.47
CCDC43-201ENST00000315286 DZANK1Q9NVP4 752 aa17.97■□□□□ 0.47
CCDC43-201ENST00000315286 PSMD11O00231 422 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 OPRD1P41143 372 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 SLC7A2P52569 658 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 MRPS22P82650 360 aaKnown RBP17.96■□□□□ 0.47
CCDC43-201ENST00000315286 TMEM115Q12893 351 aaPredicted RBP17.96■□□□□ 0.47
CCDC43-201ENST00000315286 RCAN2Q14206 197 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 ELAVL3Q14576 367 aaKnown RBP17.96■□□□□ 0.47
CCDC43-201ENST00000315286 AP5B1Q2VPB7 878 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 VPS33AQ96AX1 596 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 ASB9Q96DX5 294 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 ERLEC1Q96DZ1 483 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 DTD2Q96FN9 168 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 MRPL40Q9NQ50 206 aaKnown RBP17.96■□□□□ 0.47
CCDC43-201ENST00000315286 SUCOQ9UBS9 1254 aaKnown RBP17.96■□□□□ 0.47
CCDC43-201ENST00000315286 KLQ9UEF7 1012 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 BCAP29Q9UHQ4 241 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 KIAA1549LQ6ZVL6 1849 aa17.96■□□□□ 0.47
CCDC43-201ENST00000315286 A0A1W2PP18 115 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 H0Y858 1186 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 SLC16A5O15375 505 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 LINC01565O15544 149 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 TSPAN6O43657 245 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 SLCO2B1O94956 709 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 ACADSP16219 412 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 IL12AP29459 219 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 KCNK10P57789 538 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 EMX2Q04743 252 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 GRM2Q14416 872 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 RFTN2Q52LD8 501 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-201ENST00000315286 CMPK2Q5EBM0 449 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms