RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CDV3Q9UKY7 258 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 KCNE2Q9Y6J6 123 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 LOC100130705A0A1B0GUX0 176 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ABCB7O75027 752 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 F2P00734 622 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CYP11A1P05108 521 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 FAM163BP0C2L3 166 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CD36P16671 472 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 HOXB6P17509 224 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 TALDO1P37837 337 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 KCNQ1P51787 676 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CCL14Q16627 93 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 SLC24A5Q71RS6 500 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 SLC34A3Q8N130 599 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 OR4A15Q8NGL6 344 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 DERL2Q9GZP9 239 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 DNAJC11Q9NVH1 559 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 MEIS3P2A8K0S8 358 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CENPXA8MT69 81 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 EFCAB9A8MZ26 197 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 H0YJX3 145 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 RASAL1O95294 804 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 IMPDH2P12268 514 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CHIT1Q13231 466 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ZNF792Q3KQV3 632 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ERICH5Q6P6B1 374 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 LUZP2Q86TE4 346 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 TMEM199Q8N511 208 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 IMP4Q96G21 291 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 TNKS2Q9H2K2 1166 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ADAMTS10Q9H324 1103 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 NSUN3Q9H649 340 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 CORO2BQ9UQ03 480 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ST14Q9Y5Y6 855 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 NUMBLQ9Y6R0 609 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 COL4A1P02462 1669 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 SH3PXD2BA1X283 911 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CDK4P11802 303 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 KCNA5P22460 613 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 MAGEA3P43357 314 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ANXA11P50995 505 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 SMYD5Q6GMV2 418 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ISCA2Q86U28 154 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ST13P5Q8NFI4 369 aaPredicted RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 TMEM40Q8WWA1 233 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 RNFT2Q96EX2 444 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ZBED3Q96IU2 234 aaPredicted RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 IL12RB2Q99665 862 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 PAAF1Q9BRP4 392 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CCSER2Q9H7U1 834 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 WBP11Q9Y2W2 641 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 A0A1W2PQ67 120 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 PIPSLA2A3N6 862 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ZBTB42B2RXF5 422 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 K7EPI3 171 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CYP7B1O75881 506 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ENO2P09104 434 aaPredicted RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 CKBP12277 381 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CAPN3P20807 821 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 RFC2P35250 354 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 OLR1P78380 273 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 PDE12Q6L8Q7 609 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 TRIM40Q6P9F5 258 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 PHACTR4Q8IZ21 702 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 NPLOC4Q8TAT6 608 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CD99L2Q8TCZ2 262 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 CLP1Q92989 425 aaKnown RBP13.06□□□□□ -0.32
DDX54-201ENST00000306014 ITFG2Q969R8 447 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 SGK2Q9HBY8 427 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 TRIM39Q9HCM9 518 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 ANGPT4Q9Y264 503 aa13.06□□□□□ -0.32
DDX54-201ENST00000306014 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 PGRP06401 933 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 ASGR1P07306 291 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 HNF4AP41235 474 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 GSTM5P46439 218 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 CASP9P55211 416 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 KCNAB2Q13303 367 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 ATP6AP1Q15904 470 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 SETMARQ53H47 684 aaPredicted RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 KLHL17Q6TDP4 642 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 EPHX4Q8IUS5 362 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 LILRA2Q8N149 483 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 MINDY1Q8N5J2 469 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 TCF25Q9BQ70 676 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 CRISPLD1Q9H336 500 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 WDR6Q9NNW5 1121 aaKnown RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 MIOSQ9NXC5 875 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 MAGEB17A8MXT2 336 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 GNAO1P09471 354 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 CYP2A6P11509 494 aaPredicted RBP13.05□□□□□ -0.32
DDX54-201ENST00000306014 BMP2P12643 396 aa13.05□□□□□ -0.32
DDX54-201ENST00000306014 SPAM1P38567 509 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms