RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 SRSF11Q05519 484 aaKnown RBP16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 FBXO43Q4G163 708 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 MSS51Q4VC12 460 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.22■□□□□ 0.198e-7■■■■■ 30.4
SNAPC4-201ENST00000298532 RAD51AP1Q96B01 352 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 ISOC1Q96CN7 298 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 C10orf71Q711Q0 1435 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 GLYATL1P3A0A0U1RQE8 302 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 SMIM28A0A1B0GU29 152 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 GABRDO14764 452 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 HTRA2O43464 458 aaPredicted RBP16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 ABCB7O75027 752 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 CLDN11O75508 207 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 HNRNPDQ14103 355 aaKnown RBP16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 ZBTB6Q15916 424 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 RBM12BQ8IXT5 1001 aaKnown RBP16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 FAM98AQ8NCA5 519 aaKnown RBP16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 TNFAIP8L1Q8WVP5 186 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 TIFAQ96CG3 184 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 HAVCR1Q96D42 359 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 CRELD1Q96HD1 420 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 TMEM209Q96SK2 561 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 ITPAQ9BY32 194 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 POLR2J2Q9GZM3 115 aaKnown RBP16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 TOR3AQ9H497 397 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 SCAMP3O14828 347 aaKnown RBP16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 GPR1P46091 355 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 GSK3BP49841 420 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 IQCCQ4KMZ1 466 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 RPTNQ6XPR3 784 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 UFD1Q92890 307 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 AKTIPQ9H8T0 292 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 FAM105AQ9NUU6 356 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 MAP4K5Q9Y4K4 846 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 RAI2Q9Y5P3 530 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 TRAV19A0A0A6YYK7 116 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 OR6C70A6NIJ9 312 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 PRLP01236 227 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 PRKCHP24723 683 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 SLC6A4P31645 630 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 RPIAP49247 311 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 MPP2Q14168 576 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 RBM20Q5T481 1227 aaKnown RBP16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 GJD3Q8N144 294 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 MARVELD2Q8N4S9 558 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 IRF2BPLQ9H1B7 796 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 SIRPGQ9P1W8 387 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 ZDHHC2Q9UIJ5 367 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 CNTNAP1P78357 1384 aa16.22■□□□□ 0.19
SNAPC4-201ENST00000298532 M0R2N6 131 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 VNN1O95497 513 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 PBX3P40426 434 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 GRIA1P42261 906 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 MAPK9P45984 424 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 C2orf80Q0P641 193 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 LSAMPQ13449 338 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 DPY19L1Q2PZI1 675 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 BEND5Q7L4P6 421 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 CRYBG2Q8N1P7 616 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 XAGE5Q8WWM1 108 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 SIPA1Q96FS4 1042 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 PPP1R16AQ96I34 528 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 HNRNPABQ99729 332 aaKnown RBP16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 MKLN1Q9UL63 735 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 NCKAP1Q9Y2A7 1128 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 POU2F1P14859 743 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 SDHAF4Q5VUM1 108 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 ZDHHC20Q5W0Z9 365 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 ZNF517Q6ZMY9 492 aaPredicted RBP16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 RD3Q7Z3Z2 195 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 TREML1Q86YW5 311 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 MCMBPQ9BTE3 642 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 C11orf16Q9NQ32 467 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 EVA1BQ9NVM1 165 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 RPL36Q9Y3U8 105 aaKnown RBP16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 PHRF1Q9P1Y6 1649 aaKnown RBP16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 A8MT66 165 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 GADD45GO95257 159 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 PRAMEF1O95521 474 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 ESR1P03372 595 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 DCDC1P59894 354 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 PPP2R2BQ00005 443 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 TUSC3Q13454 348 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 KLHL22Q53GT1 634 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 RAET1GQ6H3X3 334 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 ZNF433Q8N7K0 673 aaPredicted RBP16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 ART5Q96L15 291 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 SLC39A3Q9BRY0 314 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 NEK6Q9HC98 313 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 SLC35C2Q9NQQ7 365 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 MAT2BQ9NZL9 334 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 RBPJLQ9UBG7 517 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 COMMD3Q9UBI1 195 aa16.21■□□□□ 0.19
SNAPC4-201ENST00000298532 OR14I1A6ND48 311 aa16.21■□□□□ 0.18
SNAPC4-201ENST00000298532 DLX3O60479 287 aa16.21■□□□□ 0.18
SNAPC4-201ENST00000298532 ZNF24P17028 368 aa16.21■□□□□ 0.18
SNAPC4-201ENST00000298532 DNAJA1P31689 397 aaKnown RBP16.21■□□□□ 0.18
SNAPC4-201ENST00000298532 PTGES3Q15185 160 aaKnown RBP16.21■□□□□ 0.18
SNAPC4-201ENST00000298532 SH3PXD2AQ5TCZ1 1133 aa16.21■□□□□ 0.18
SNAPC4-201ENST00000298532 TXNRD3NBQ6F5E7 133 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms