RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 SRCP12931 536 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CA8P35219 290 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CDH15P55291 814 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 HMGCS1Q01581 520 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 PWP1Q13610 501 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 ARHGEF7Q14155 803 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 KIAA0040Q15053 153 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 MPPE1Q53F39 396 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 LRRC66Q68CR7 880 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CRTC1Q6UUV9 634 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 HTR3DQ70Z44 454 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 DDX53Q86TM3 631 aaKnown RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 HS6ST3Q8IZP7 471 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CBARPQ8N350 705 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CPXM2Q8N436 756 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 FIBINQ8TAL6 211 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 UBTD2Q8WUN7 234 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CYGBQ8WWM9 190 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 MRPS31Q92665 395 aaKnown RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 VOPP1Q96AW1 172 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 TMIGD2Q96BF3 282 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 VPS50Q96JG6 964 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 NSMCE2Q96MF7 247 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 RC3H2Q9HBD1 1191 aaKnown RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 GPBP1L1Q9HC44 474 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 ZFP14Q9HCL3 533 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 PAK6Q9NQU5 681 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 TLR9Q9NR96 1032 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 VAPAQ9P0L0 249 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 ZNF490Q9ULM2 529 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 SLC8A2Q9UPR5 921 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CEPT1Q9Y6K0 416 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 AGAP14A8MT82 685 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 LOC730098B7Z3J9 87 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 FKTNO75072 461 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 ULK1O75385 1050 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 SEC24DO94855 1032 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 KCNH1O95259 989 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CLIC3O95833 236 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 LDLRP01130 860 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 EPB42P16452 691 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 GJA1P17302 382 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CDH2P19022 906 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 NSG1P42857 185 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 DEFB103AP81534 67 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 TLE2Q04725 743 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 RBBP5Q15291 538 aaKnown RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 TTLL9Q3SXZ7 439 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 FAM174BQ3ZCQ3 159 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 TRIM60Q495X7 471 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 SGO1Q5FBB7 561 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 MPP7Q5T2T1 576 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 TTC33Q6PID6 262 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 SLC39A5Q6ZMH5 540 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 METTL3Q86U44 580 aaKnown RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 ZNF786Q8N393 782 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 HM13Q8TCT9 377 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 MAGEE2Q8TD90 523 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 SLC13A3Q8WWT9 602 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 ASIC4Q96FT7 647 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 FBXL20Q96IG2 436 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 LYSMD1Q96S90 227 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 NTMT1Q9BV86 223 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CHID1Q9BWS9 393 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 RDH14Q9HBH5 336 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 SPG21Q9NZD8 308 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 EIF3LQ9Y262 564 aaKnown RBP9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 TRIM17Q9Y577 477 aa9.12□□□□□ -0.95
UBLCP1-201ENST00000296786 CHD7Q9P2D1 2997 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 DFNA5O60443 496 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 STK16O75716 305 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 EBLN1P0CF75 366 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 C7P10643 843 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 CDH1P12830 882 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 PCSK6P29122 969 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 ALDH3B2P48448 385 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 SNRPD1P62314 119 aaKnown RBP9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 TUBA4AP68366 448 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 SLC7A9P82251 487 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 B4GALNT1Q00973 533 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 MAD2L1Q13257 205 aaPredicted RBP9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 IMPG1Q17R60 797 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 ATP13A5Q4VNC0 1218 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 TPRG1Q6ZUI0 275 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 RGL4Q8IZJ4 473 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 OFCC1Q8IZS5 231 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 CMTM8Q8IZV2 173 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 LIX1Q8N485 282 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 OR8J3Q8NGG0 315 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 BPIFB1Q8TDL5 484 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 OSCP1Q8WVF1 389 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 ULK4Q96C45 1275 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 SCRN2Q96FV2 425 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 ZNF583Q96ND8 569 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 ZBTB18Q99592 522 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 SMG9Q9H0W8 520 aaKnown RBP9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 C8orf4Q9NR00 106 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 SMPD3Q9NY59 655 aaPredicted RBP9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 TRPS1Q9UHF7 1281 aa9.11□□□□□ -0.95
UBLCP1-201ENST00000296786 ZNF510Q9Y2H8 683 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms