RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 LIN7AO14910 233 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 PIM1P11309 404 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 FAM180AQ6UWF9 173 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 MBOAT1Q6ZNC8 495 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 CYP2U1Q7Z449 544 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 C11orf65Q8NCR3 313 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 NECTIN3Q9NQS3 549 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 ADGRE2Q9UHX3 823 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 PRKAB1Q9Y478 270 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 PRR5-ARHGAP8B1AHC4 643 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZNF487B1APH4 448 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 LAMTOR5O43504 91 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 C4BPBP20851 252 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 CSNK2BP67870 215 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 ARHGAP8P85298 464 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 RASGRP3Q8IV61 690 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 RASSF5Q8WWW0 418 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZBED6CLQ96FA7 236 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 SPATA6Q9NWH7 488 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 FLRT1Q9NZU1 646 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 LRCH1Q9Y2L9 728 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 GSTK1Q9Y2Q3 226 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 RGS8P57771 180 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 FAM171BQ6P995 826 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 GK5Q6ZS86 529 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 FBXO15Q8NCQ5 510 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 NPAS2Q99743 824 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 SUSD2Q9UGT4 822 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 KAT7O95251 611 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 FGFR3P22607 806 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 USP46P62068 366 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 RPP38P78345 283 aaKnown RBP17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 ABHD13Q7L211 337 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 PHOSPHO2Q8TCD6 241 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 SLCO2A1Q92959 643 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 PAAF1Q9BRP4 392 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 KLHL25Q9H0H3 589 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 GRHL1Q9NZI5 618 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 HAS3O00219 553 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 TGM5O43548 720 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 CST5P28325 142 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 ST13P50502 369 aaKnown RBP17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZNF805Q5CZA5 627 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 NUDT13Q86X67 352 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 GLB1L3Q8NCI6 653 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 OR10H5Q8NGA6 315 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 ESAMQ96AP7 390 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 EGFL7Q9UHF1 273 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 A0A087WXM4 84 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 RFPL2O75678 378 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 IL12BP29460 328 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 GJD3Q8N144 294 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 TMEM145Q8NBT3 493 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 SLC2A13Q96QE2 648 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 NCDNQ9UBB6 729 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 SNX7Q9UNH6 387 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 MAP4K5Q9Y4K4 846 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 PTGESO14684 152 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 CSTF2P33240 577 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 SLC47A1Q96FL8 570 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 DPY19L1Q2PZI1 675 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 BNIPLQ7Z465 357 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 C14orf80Q86SX3 495 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 PNPT1Q8TCS8 783 aaKnown RBP17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 DENND1AQ8TEH3 1009 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 DCAKDQ8WVC6 231 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 FEM1AQ9BSK4 669 aa17.4■□□□□ 0.38
CDC42EP3-201ENST00000295324 GRID2O43424 1007 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 AQP1P29972 269 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 RUNX3Q13761 415 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 NRF1Q16656 503 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 CST9Q5W186 159 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 POMZP3Q6PJE2 187 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 LIX1Q8N485 282 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZNF354BQ96LW1 612 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 SGIP1Q9BQI5 828 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 TRIM24O15164 1050 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 MFN2O95140 757 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 KLK3P07288 261 aaPredicted RBP17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 RPS14P62263 151 aaKnown RBP17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 LMAN2Q12907 356 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 HSPB3Q12988 150 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 HBEGFQ99075 208 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 ACSS2Q9NR19 701 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 PTPN5P54829 565 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 RPS21P63220 83 aaKnown RBP17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 SLBPQ14493 270 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 PIK3C3Q8NEB9 887 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 MYO9BQ13459 2157 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 TCRBV21S2A2A0A5A6 115 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 FAM86C2PA6NEL3 165 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 PDPK1O15530 556 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 WFS1O76024 890 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 CYP11A1P05108 521 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 TBC1D21Q8IYX1 336 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 C19orf18Q8NEA5 215 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 VANGL1Q8TAA9 524 aaPredicted RBP17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 MTERF1Q99551 399 aaKnown RBP17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 TAPBPLQ9BX59 468 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms