RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 FSHRP23945 695 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 CCND3P30281 292 aaPredicted RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 SHMT2P34897 504 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 HSPA13P48723 471 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 TWF1Q12792 350 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 RAB39AQ14964 217 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 AARS2Q5JTZ9 985 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 ARMC12Q5T9G4 340 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 ELMSAN1Q6PJG2 1045 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 RNF19BQ6ZMZ0 732 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 KCTD8Q6ZWB6 473 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 DDI1Q8WTU0 396 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 FAR2Q96K12 515 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 TSEN34Q9BSV6 310 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 BOCQ9BWV1 1114 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 TM6SF2Q9BZW4 377 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 EPB41L1Q9H4G0 881 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 IKZF5Q9H5V7 419 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 ARNT2Q9HBZ2 717 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 MYO7AQ13402 2215 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 LOC285095A0A1B0GVY8 99 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 E2F3O00716 465 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 ADAM12O43184 909 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 RPP40O75818 363 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 CAPN1P07384 714 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 AKR1A1P14550 325 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 MC4RP32245 332 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 TRIM23P36406 574 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 ERVPABLB-1P60509 514 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 RFTN2Q52LD8 501 aaPredicted RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 ATXN7L2Q5T6C5 722 aaPredicted RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 ANKS6Q68DC2 871 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 STK32CQ86UX6 486 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 SERINC5Q86VE9 423 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 KLHDC8BQ8IXV7 354 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 KCT2Q8NC54 265 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 SUSD3Q96L08 255 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 DGCR6LQ9BY27 220 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 C8orf33Q9H7E9 229 aaPredicted RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 MRM3Q9HC36 420 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 WASH6PQ9NQA3 447 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 SDHAF3Q9NRP4 125 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 POLR3HQ9Y535 204 aaPredicted RBP13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 PCDHA9Q9Y5H5 950 aa13.06□□□□□ -0.32
KCNIP3-201ENST00000295225 SH3BGRLO75368 114 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 FKBP9O95302 570 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 CRYZL1O95825 349 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 CAPNS1P04632 268 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 EFNA1P20827 205 aaPredicted RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 MATN1P21941 496 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 ALDH3B2P48448 385 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 LIMK1P53667 647 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 GNA12Q03113 381 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 LCP2Q13094 533 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 CRHR2Q13324 411 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 DCTN2Q13561 401 aaKnown RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 FAM180BQ6P0A1 224 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 ENPP6Q6UWR7 440 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 Q6ZSR9 355 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 ANKRD46Q86W74 232 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 CAMK1DQ8IU85 385 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 PDZD8Q8NEN9 1154 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 NPLQ9BXD5 320 aaPredicted RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 FANCEQ9HB96 536 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 SLC52A3Q9NQ40 469 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 SDR39U1Q9NRG7 319 aaPredicted RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 TMEM248Q9NWD8 314 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 K7ERQ8 282 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 ARVCFO00192 962 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 SLC22A3O75751 556 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 SERPINF2P08697 491 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 BMP2P12643 396 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 DNAJB1P25685 340 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 IFNA8P32881 189 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 SEPHS1P49903 392 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 CDK9P50750 372 aaKnown RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 POLR2JP52435 117 aaKnown RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 LSM3P62310 102 aaKnown RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 MLLT1Q03111 559 aaPredicted RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 TRAF2Q12933 501 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 ATP1A4Q13733 1029 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 INPP5AQ14642 412 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 CYBRD1Q53TN4 286 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 LRRC73Q5JTD7 316 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 GLYATQ6IB77 296 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 LYSMD3Q7Z3D4 306 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 ZC3H7AQ8IWR0 971 aaKnown RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 DCP1BQ8IZD4 617 aaKnown RBP13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 CLEC4FQ8N1N0 589 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 C10orf111Q8N326 155 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 KRTCAP2Q8N6L1 136 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 ANKFN1Q8N957 763 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 PROKR1Q8TCW9 393 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 MYOCQ99972 504 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 ATP13A3Q9H7F0 1226 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 NMRK2Q9NPI5 230 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 PLK2Q9NYY3 685 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 DPP7Q9UHL4 492 aa13.05□□□□□ -0.32
KCNIP3-201ENST00000295225 PATJQ8NI35 1801 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms