RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 K7EPI3 171 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 KDELR3O43731 214 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 RNASEH2AO75792 299 aaKnown RBP14.09□□□□□ -0.15
TMEM47-201ENST00000275954 PAPSS2O95340 614 aaPredicted RBP14.09□□□□□ -0.15
TMEM47-201ENST00000275954 EPOP01588 193 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 EPHX1P07099 455 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 CD1DP15813 335 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 PTPN2P17706 415 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 DDX5P17844 614 aaKnown RBP14.09□□□□□ -0.15
TMEM47-201ENST00000275954 RHDQ02161 417 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 LYPLAL1Q5VWZ2 237 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 MRPL10Q7Z7H8 261 aaKnown RBP14.09□□□□□ -0.15
TMEM47-201ENST00000275954 DEFB119Q8N690 84 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 NRG4Q8WWG1 115 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 ACDQ96AP0 544 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 RAPGEFL1Q9UHV5 662 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 DNAJC15Q9Y5T4 150 aa14.09□□□□□ -0.15
TMEM47-201ENST00000275954 CACNA1HO95180 2353 aa14.08□□□□□ -0.15
TMEM47-201ENST00000275954 OR6B1O95007 311 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 IRS1P35568 1242 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 ADARP55265 1226 aaKnown RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 RFTN1Q14699 578 aaPredicted RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 TMEM220Q6QAJ8 160 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 MBOAT1Q6ZNC8 495 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 OR2AP1Q8NGE2 309 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 CXorf40AQ8TE69 158 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 AURKBQ96GD4 344 aaPredicted RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 BBS4Q96RK4 519 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 APOL4Q9BPW4 351 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 TMCO1Q9UM00 188 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 SLC9A3R1O14745 358 aaPredicted RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 KPNA5O15131 536 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 BCAS2O75934 225 aaPredicted RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 CYP11A1P05108 521 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 DCTN2Q13561 401 aaKnown RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 CYP2A13Q16696 494 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 PAGE2BQ5JRK9 111 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 PDSS2Q86YH6 399 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 ZNF540Q8NDQ6 660 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 NELL1Q92832 810 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 PTERQ96BW5 349 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 TRIM45Q9H8W5 580 aaPredicted RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 DDX28Q9NUL7 540 aaKnown RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 C1orf109Q9NX04 203 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 DEC1Q9P2X7 70 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 SLCO3A1Q9UIG8 710 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 TTC3P53804 2025 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 COL24A1Q17RW2 1714 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 ANXA4P09525 319 aaPredicted RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 LAPTM5Q13571 262 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 HERC3Q15034 1050 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 SPANXN4Q5MJ08 99 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 LDLRAP1Q5SW96 308 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 SULT1C3Q6IMI6 304 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 C2orf15Q8WU43 125 aaKnown RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 NACC2Q96BF6 587 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 C6orf62Q9GZU0 229 aaPredicted RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 RHBGQ9H310 441 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 LIN28AQ9H9Z2 209 aaKnown RBP14.08□□□□□ -0.16
TMEM47-201ENST00000275954 RNF11Q9Y3C5 154 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 INSL5Q9Y5Q6 135 aa14.08□□□□□ -0.16
TMEM47-201ENST00000275954 NBASA2RRP1 2371 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 HLA-EP13747 358 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 GNAZP19086 355 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 RPS14P62263 151 aaKnown RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 RUNX1T1Q06455 604 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 C18orf21Q32NC0 220 aaPredicted RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 NADK2Q4G0N4 442 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 CPTPQ5TA50 214 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 BROXQ5VW32 411 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 LRRC66Q68CR7 880 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 Q6ZVL8 140 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 BBS7Q8IWZ6 715 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 FEM1AQ9BSK4 669 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 IMP3Q9NV31 184 aaKnown RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 FNIP2Q9P278 1114 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 TPRKBQ9Y3C4 175 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 CAPN14A8MX76 684 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 TGM5O43548 720 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 CNOT3O75175 753 aaKnown RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 CYP7B1O75881 506 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 IFNA14P01570 189 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 APOA1P02647 267 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 SOD2P04179 222 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 ERVFC1P60507 584 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 ITGADQ13349 1161 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 CNPY1Q3B7I2 92 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 ARSIQ5FYB1 569 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 CHST15Q7LFX5 561 aaPredicted RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 METTL3Q86U44 580 aaKnown RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 PROSER1Q86XN7 944 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 PIANPQ8IYJ0 282 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 ZCCHC7Q8N3Z6 543 aaKnown RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 AMBNQ9NP70 447 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 DUS2Q9NX74 493 aaKnown RBP14.07□□□□□ -0.16
TMEM47-201ENST00000275954 WNK3Q9BYP7 1800 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 RREB1Q92766 1687 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 FOXA1P55317 472 aa14.07□□□□□ -0.16
TMEM47-201ENST00000275954 NFKB2Q00653 900 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms