RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CYP2U1Q7Z449 544 aa11.3□□□□□ -0.6
USP53-201ENST00000274030 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
USP53-201ENST00000274030 SH3RF2Q8TEC5 729 aa11.3□□□□□ -0.6
USP53-201ENST00000274030 TWNKQ96RR1 684 aa11.3□□□□□ -0.6
USP53-201ENST00000274030 CORO1CQ9ULV4 474 aaPredicted RBP11.3□□□□□ -0.6
USP53-201ENST00000274030 WBP11Q9Y2W2 641 aaKnown RBP11.3□□□□□ -0.6
USP53-201ENST00000274030 DHRS7Q9Y394 339 aa11.3□□□□□ -0.6
USP53-201ENST00000274030 ADGRB2O60241 1585 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 NRP1O14786 923 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 NME6O75414 186 aaPredicted RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 NSG1P42857 185 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 OLR1P78380 273 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 SLC10A7Q0GE19 358 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 TAF1AQ15573 450 aaPredicted RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 GFOD2Q3B7J2 385 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 BANPQ8N9N5 519 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 GAS2L1Q99501 681 aaPredicted RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 SLC38A3Q99624 504 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 DSN1Q9H410 356 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 MINDY3Q9H8M7 445 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 TBC1D17Q9HA65 648 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 AMBNQ9NP70 447 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 ARHGEF28Q8N1W1 1705 aaKnown RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 E7ENX8 843 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 IFNA6P05013 189 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 PSMA1P25786 263 aaKnown RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 MYBPC3Q14896 1274 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 AMZ1Q400G9 498 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 SMPDL3BQ92485 455 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 IL12RB2Q99665 862 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 OSBPL7Q9BZF2 842 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 CCSER2Q9H7U1 834 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 PIGVQ9NUD9 493 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 C1orf109Q9NX04 203 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 CFAP20Q9Y6A4 193 aaKnown RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 A0A0G2JLL6 359 aaPredicted RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 CXCR6O00574 342 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 ASLP04424 464 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 HLA-DQB2P05538 268 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 MTHFD1P11586 935 aaKnown RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 FOXN2P32314 431 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 RPS14P62263 151 aaKnown RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 OLIG2Q13516 323 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 PRRT2Q7Z6L0 340 aaPredicted RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 ZDHHC21Q8IVQ6 265 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 CYB5D2Q8WUJ1 264 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 ELOVL2Q9NXB9 296 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 KDM4FA0A1W2PPD8 638 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 RIIAD1A6NNX1 92 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 SLC7A4O43246 635 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 PRODHO43272 600 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 WFS1O76024 890 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 IL7RP16871 459 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 ZNF8P17098 575 aaPredicted RBP11.29□□□□□ -0.6
USP53-201ENST00000274030 HTR7P34969 479 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 GGT5P36269 586 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 SP2Q02086 613 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 PLET1Q6UQ28 207 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 MCEMP1Q8IX19 187 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 PLD4Q96BZ4 506 aa11.29□□□□□ -0.6
USP53-201ENST00000274030 GNALP38405 381 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 XIAPP98170 497 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 ROR2Q01974 943 aaKnown RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 NPY5RQ15761 445 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 ARSIQ5FYB1 569 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 GPR153Q6NV75 609 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 HFE2Q6ZVN8 426 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 KBTBD7Q8WVZ9 684 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 CENPNQ96H22 339 aaPredicted RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 TRMT61BQ9BVS5 477 aaKnown RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 ADAP2Q9NPF8 381 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 SIRPGQ9P1W8 387 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 CKLFQ9UBR5 152 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 LGALS13Q9UHV8 139 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 RBMX2Q9Y388 322 aaKnown RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 KERAO60938 352 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 TGFB1P01137 390 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 GNAZP19086 355 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 CTSOP43234 321 aaPredicted RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 AQP4P55087 323 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 CREB5Q02930 508 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 GAD2Q05329 585 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 HEPACAMQ14CZ8 416 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 DNAJB7Q7Z6W7 309 aaPredicted RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 TTC29Q8NA56 475 aaPredicted RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 ZNF483Q8TF39 744 aaPredicted RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 PNPLA8Q9NP80 782 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 DNAAF2Q9NVR5 837 aaKnown RBP11.28□□□□□ -0.6
USP53-201ENST00000274030 TVP23BQ9NYZ1 205 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 MTRRQ9UBK8 725 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 PPLO60437 1756 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 EOMESO95936 686 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 LYNP07948 512 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 ACP5P13686 325 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 ARFIP1P53367 373 aa11.28□□□□□ -0.6
USP53-201ENST00000274030 UBXN2BQ14CS0 331 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms