RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PYDC1Q8WXC3 89 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 SLC28A3Q9HAS3 691 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 CNOT6Q9ULM6 557 aaKnown RBP16.28■□□□□ 0.2
CCDC40-201ENST00000269318 CCL27Q9Y4X3 112 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 ANGPTL3Q9Y5C1 460 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 TBC1D3BA6NDS4 549 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 TMEM202A6NGA9 273 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 E7ENX8 843 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 QSOX1O00391 747 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 NR5A2O00482 541 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 ADRB3P13945 408 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 EPB42P16452 691 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 ME2P23368 584 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 IL12RB1P42701 662 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 MS4A2Q01362 244 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 GRM2Q14416 872 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 ABRAXAS2Q15018 415 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 BLOC1S3Q6QNY0 202 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 IL27RAQ6UWB1 636 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 RNF111Q6ZNA4 994 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 TCAIMQ8N3R3 496 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 SLC26A7Q8TE54 656 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 ASZ1Q8WWH4 475 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 ROPN1LQ96C74 230 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 MYADMQ96S97 322 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 MAP10Q9P2G4 905 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 THAP10Q9P2Z0 257 aaPredicted RBP16.27■□□□□ 0.2
CCDC40-201ENST00000269318 TRPS1Q9UHF7 1281 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 COQ6Q9Y2Z9 468 aa16.27■□□□□ 0.2
CCDC40-201ENST00000269318 PLK4O00444 970 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 LSM1O15116 133 aaKnown RBP16.27■□□□□ 0.19
CCDC40-201ENST00000269318 EBLN1P0CF75 366 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 SLC6A12P48065 614 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 PIK3CGP48736 1102 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 PRLHRP49683 370 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 RPS6KA2Q15349 733 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 ATP6AP1LQ52LC2 224 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 PDCD4Q53EL6 469 aaKnown RBP16.27■□□□□ 0.19
CCDC40-201ENST00000269318 RNF148Q8N7C7 305 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 TSPEARQ8WU66 669 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 SKA2Q8WVK7 121 aaPredicted RBP16.27■□□□□ 0.19
CCDC40-201ENST00000269318 PPP1R16AQ96I34 528 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 SLC45A3Q96JT2 553 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 TEX37Q96LM6 180 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 P2RY13Q9BPV8 354 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 TRIM54Q9BYV2 358 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 SLC32A1Q9H598 525 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 HEBP1Q9NRV9 189 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 NMRK1Q9NWW6 199 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 DOCK8Q8NF50 2099 aa16.27■□□□□ 0.19
CCDC40-201ENST00000269318 LOC730098B7Z3J9 87 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 C9JVG2 144 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 TRIM38O00635 465 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 ACOT8O14734 319 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 TSPAN6O43657 245 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 RECQL5O94762 991 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-201ENST00000269318 HMOX2P30519 316 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 EIF2DP41214 584 aaKnown RBP16.26■□□□□ 0.19
CCDC40-201ENST00000269318 HNMTP50135 292 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 TMEM115Q12893 351 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-201ENST00000269318 RCAN2Q14206 197 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 VPS26BQ4G0F5 336 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 COQ5Q5HYK3 327 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 TLDC1Q6P9B6 456 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 ZNF765Q7L2R6 523 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 LRRC70Q7Z2Q7 622 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 NLRP8Q86W28 1048 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 FNDC5Q8NAU1 212 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 HIPK4Q8NE63 616 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 UCMAQ8WVF2 138 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 ZNF570Q96NI8 536 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 HBEGFQ99075 208 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 GPATCH1Q9BRR8 931 aaKnown RBP16.26■□□□□ 0.19
CCDC40-201ENST00000269318 C1orf50Q9BV19 199 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 SPAG4Q9NPE6 437 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 PRSS16Q9NQE7 514 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 TMEM181Q9P2C4 612 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 CROTQ9UKG9 612 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 NDUFAF1Q9Y375 327 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 RNF11Q9Y3C5 154 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 H3BNX3 289 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 INPP4BO15327 924 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 SYNCRIPO60506 623 aaKnown RBP16.26■□□□□ 0.19
CCDC40-201ENST00000269318 WDR47O94967 919 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 KAT7O95251 611 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 HIST1H2AGP0C0S8 130 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-201ENST00000269318 C6P13671 934 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 HIST1H2ADP20671 130 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 MSX2P35548 267 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-201ENST00000269318 AP1S2P56377 157 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 EMX2Q04743 252 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 TMEM52BQ4KMG9 183 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 ZNF658BQ4V348 819 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-201ENST00000269318 PCYOX1LQ8NBM8 494 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 SUSD6Q92537 303 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 HIST1H2AHQ96KK5 128 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 HIST1H2AJQ99878 128 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 KXD1Q9BQD3 176 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 H2AFJQ9BTM1 129 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms