RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 EPS8Q12929 822 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 TTC23Q5W5X9 447 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 TRIM74Q86UV6 250 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 TMEM145Q8NBT3 493 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 CLPTM1LQ96KA5 538 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 C3orf18Q9UK00 162 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 A8MT66 165 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 EDIL3O43854 480 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 PGLSO95336 258 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 TNFP01375 233 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 FOXN2P32314 431 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 ZNF155Q12901 538 aaPredicted RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 HEPACAMQ14CZ8 416 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 ALG11Q2TAA5 492 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 ZNF783Q6ZMS7 281 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 DDX28Q9NUL7 540 aaKnown RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 OXSMQ9NWU1 459 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 GMEB2Q9UKD1 530 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 C15orf41Q9Y2V0 281 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 PCDHGB3Q9Y5G1 929 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 GMPPBQ9Y5P6 360 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 GSC2O15499 205 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 BMP7P18075 431 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 BDKRB1P46663 353 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 KLF1Q13351 362 aaPredicted RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 DHCR24Q15392 516 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 RFTN2Q52LD8 501 aaPredicted RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 CILP2Q8IUL8 1156 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 SNRNP27Q8WVK2 155 aaKnown RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 TFGQ92734 400 aaPredicted RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 RUVBL1Q9Y265 456 aaKnown RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 U3KQV3 271 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 ATXN2Q99700 1313 aaKnown RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 LINC00854A0A1B0GVQ3 168 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 EPCAMP16422 314 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 NEK2P51955 445 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 RPS14P62263 151 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 CYP4F3Q08477 520 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 SLBPQ14493 270 aaKnown RBP eCLIP13.47□□□□□ -0.25
NPC1-201ENST00000269228 SPPL2CQ8IUH8 684 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 IGDCC3Q8IVU1 814 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 ANKLE1Q8NAG6 615 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 NMD3Q96D46 503 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 HHIPL1Q96JK4 782 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 USP29Q9HBJ7 922 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 PPM1HQ9ULR3 514 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 ANKRD36CQ5JPF3 1778 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 KERAO60938 352 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 PCYT1AP49585 367 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 UGT2B15P54855 530 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 TAS2R41P59536 307 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 NFKB2Q00653 900 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 BPIFB6Q8NFQ5 453 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 CASD1Q96PB1 797 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 SLC22A14Q9Y267 594 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 TJP1Q07157 1748 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 KAT7O95251 611 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 PAK4O96013 591 aaPredicted RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 ADH1BP00325 375 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 CCDC159P0C7I6 412 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 PTDSS1P48651 473 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 BEND5Q7L4P6 421 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 SLC39A11Q8N1S5 342 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 IMP4Q96G21 291 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 ZNF641Q96N77 438 aaPredicted RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 TUBGCP5Q96RT8 1024 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 GPR22Q99680 433 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 ADI1Q9BV57 179 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 MYH8P13535 1937 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 SOCS5O75159 536 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 MATN4O95460 622 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 NDUFS1P28331 727 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 ZNF805Q5CZA5 627 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 PRAMEF14Q5SWL7 426 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 PRAMEF13Q5VWM6 474 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 ERN2Q76MJ5 926 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 CNTD1Q8N815 330 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 ZNF563Q8TA94 476 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 SLC22A18Q96BI1 424 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 NLE1Q9NVX2 485 aaPredicted RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 GALPQ9UBC7 116 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 MRTO4Q9UKD2 239 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 PAIP2BQ9ULR5 123 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 PPIEQ9UNP9 301 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 SAMD4AQ9UPU9 718 aaKnown RBP13.47□□□□□ -0.25
NPC1-201ENST00000269228 SH3GLB1Q9Y371 365 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 PCDHGA4Q9Y5G9 962 aa13.47□□□□□ -0.25
NPC1-201ENST00000269228 CPN2P22792 545 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 HSD17B2P37059 387 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 AP1S2P56377 157 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 HMGCS1Q01581 520 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 LIPEQ05469 1076 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 FAM174BQ3ZCQ3 159 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 DGKKQ5KSL6 1271 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 REP15Q6BDI9 236 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 FAM171BQ6P995 826 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 WDR36Q8NI36 951 aaKnown RBP13.46□□□□□ -0.25
NPC1-201ENST00000269228 DNASE1L2Q92874 299 aa13.46□□□□□ -0.25
NPC1-201ENST00000269228 ANKRD27Q96NW4 1050 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms