RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 PRPF19Q9UMS4 504 aaKnown RBP18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 ASF1AQ9Y294 204 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 FRMPD3Q5JV73 1810 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 ALDOCP09972 364 aaKnown RBP18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 EFNA1P20827 205 aaPredicted RBP18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 CSNK1DP48730 415 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 CTSCP53634 463 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 ZDHHC20Q5W0Z9 365 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 DHFR2Q86XF0 187 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 CPEB1Q9BZB8 566 aaKnown RBP18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 TRIM38O00635 465 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 ZNF30P17039 623 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 ABRAXAS2Q15018 415 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 SAMD4BQ5PRF9 694 aaKnown RBP18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 AMIGO2Q86SJ2 522 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 SLC2A11Q9BYW1 496 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 ZCCHC2Q9C0B9 1178 aaKnown RBP18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 EBF2Q9HAK2 575 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 CCDC160A6NGH7 325 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 CLDN9O95484 217 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 APODP05090 189 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 COL9A2Q14055 689 aaPredicted RBP18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 DHDDSQ86SQ9 333 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 VRK3Q8IV63 474 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 NUDT8Q8WV74 236 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 ZSCAN5AQ9BUG6 496 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 P2RY12Q9H244 342 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 DTNAQ9Y4J8 743 aa18.34■□□□□ 0.53
SMARCC2-201ENST00000267064 RNF103-CHMP3A0A140T963 221 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 KAT7O95251 611 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 MT-ND1P03886 318 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 GSNP06396 782 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 RPS17P08708 135 aaKnown RBP18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 G6PDP11413 515 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 SUOXP51687 545 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 POLR2JP52435 117 aaKnown RBP18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 SGCGQ13326 291 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 RUNX3Q13761 415 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 OR14C36Q8NHC7 312 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 GLYATL1Q969I3 302 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 NUS1Q96E22 293 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 CD244Q9BZW8 370 aa18.33■□□□□ 0.53
SMARCC2-201ENST00000267064 TSPAN12O95859 305 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 PFKLP17858 780 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 NFKB2Q00653 900 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 C6orf136Q5SQH8 315 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 FAM91A1Q658Y4 838 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 SBSNQ6UWP8 590 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 CPSF7Q8N684 471 aaKnown RBP18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 TUBB1Q9H4B7 451 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 TRIOBPQ9H2D6 2365 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 ARHGAP10A1A4S6 786 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 LINC01565O15544 149 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 CTSLP07711 333 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 PTGR1Q14914 329 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 LARP4Q71RC2 724 aaKnown RBP eCLIP18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 ANKRD46Q86W74 232 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 FAM217AQ8IXS0 508 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 EBPLQ9BY08 206 aa18.33■□□□□ 0.52
SMARCC2-201ENST00000267064 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 GNG14A0A1W2PPG7 69 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 PDZK1P1A8MUH7 402 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 PEX2P28328 305 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 ADSLP30566 484 aaPredicted RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 ELP6Q0PNE2 266 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 HDDC3Q8N4P3 179 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 ZNF513Q8N8E2 541 aaPredicted RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 TIFAQ96CG3 184 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 KCTD14Q9BQ13 255 aaPredicted RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 OSBPL6Q9BZF3 934 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 MBD1Q9UIS9 605 aaPredicted RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 PDE10AQ9Y233 779 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 KPNA5O15131 536 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 SLC31A1O15431 190 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 RPL10P27635 214 aaKnown RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 LIPIQ6XZB0 460 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 TERB1Q8NA31 727 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 CHFRQ96EP1 664 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 ASB16Q96NS5 453 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 LRTM1Q9HBL6 345 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 DNAJC11Q9NVH1 559 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 GMPR2Q9P2T1 348 aaKnown RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 TMCO1Q9UM00 188 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 OTOL1A6NHN0 477 aaPredicted RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 CPSF4O95639 269 aaKnown RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 NCK1P16333 377 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 GNPDA1P46926 289 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 NRF1Q16656 503 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 KANK2Q63ZY3 851 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 CBARPQ8N350 705 aaPredicted RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 PPP3R2Q96LZ3 170 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 TMEM74Q96NL1 305 aa18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 TRMT61BQ9BVS5 477 aaKnown RBP18.32■□□□□ 0.52
SMARCC2-201ENST00000267064 TBC1D3DA0A087WVF3 549 aa18.31■□□□□ 0.52
SMARCC2-201ENST00000267064 TBC1D3IA0A087WXS9 549 aa18.31■□□□□ 0.52
SMARCC2-201ENST00000267064 TBC1D3EA0A087X179 549 aa18.31■□□□□ 0.52
SMARCC2-201ENST00000267064 TBC1D3KA0A087X1G2 549 aa18.31■□□□□ 0.52
SMARCC2-201ENST00000267064 TBC1D3FA6NER0 549 aaPredicted RBP18.31■□□□□ 0.52
SMARCC2-201ENST00000267064 TBC1D3LB9A6J9 549 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms