RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ITIH5Q86UX2 942 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 PTRH1Q86Y79 214 aaKnown RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 FAM217AQ8IXS0 508 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 FAM47BQ8NA70 645 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 GOLM1Q8NBJ4 401 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 TRPV3Q8NET8 790 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 CENPNQ96H22 339 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 GAS2L1Q99501 681 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 C9orf16Q9BUW7 83 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 ANKRD60Q9BZ19 345 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 ABCG8Q9H221 673 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 SMOXQ9NWM0 555 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 OPTCQ9UBM4 332 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 PADI4Q9UM07 663 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 OAZ3Q9UMX2 235 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 MYRFQ9Y2G1 1151 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 C5orf42Q9H799 3197 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 TRBV5-4A0A0C4DH59 114 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 RNF103-CHMP3A0A140T963 221 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 NPIPB15A6NHN6 443 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 H3BNH8 94 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 TEX28O15482 410 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 SOCS5O75159 536 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 H6PDO95479 791 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 SLC2A4P14672 509 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 CCT8P50990 548 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 LSAMPQ13449 338 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 SGO1Q5FBB7 561 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 DGKKQ5KSL6 1271 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 FIBCD1Q8N539 461 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 PACRGLQ8N7B6 248 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 RMND5BQ96G75 393 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 SEPHS2Q99611 448 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 HAUS8Q9BT25 410 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 TLR9Q9NR96 1032 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 FARSBQ9NSD9 589 aaKnown RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 KLQ9UEF7 1012 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 BRWD1Q9NSI6 2320 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 DLGAP1O14490 977 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 ZNF821O75541 412 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 ENO2P09104 434 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 GNAO1P09471 354 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 FCGR1AP12314 374 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 RPL10P27635 214 aaKnown RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 SERPINA4P29622 427 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 NR1H2P55055 460 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 LYPLAL1Q5VWZ2 237 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 DLEU7Q6UYE1 221 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 FAM43BQ6ZT52 329 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 GAREM2Q75VX8 874 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 HID1Q8IV36 788 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 ADGRG2Q8IZP9 1017 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 NXPE1Q8N323 547 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 MFSD2AQ8NA29 543 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 ZFP28Q8NHY6 868 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 MRPS31Q92665 395 aaKnown RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 TFAP2CQ92754 450 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 ISG20Q96AZ6 181 aaKnown RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 BIRC7Q96CA5 298 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 PPP3R2Q96LZ3 170 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 SH3GL3Q99963 347 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 LRRC3Q9BY71 257 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 CD244Q9BZW8 370 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 SMG9Q9H0W8 520 aaKnown RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 RPF2Q9H7B2 306 aaKnown RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 LATS2Q9NRM7 1088 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 OLAHQ9NV23 265 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 SPG21Q9NZD8 308 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 INTS6Q9UL03 887 aaKnown RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 DMTF1Q9Y222 760 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 BDP1A6H8Y1 2624 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 EI24O14681 340 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 VARSP26640 1264 aaKnown RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 HTR1EP28566 365 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 MAPK8P45983 427 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 HMGCS1Q01581 520 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 PLEKHG6Q3KR16 790 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 AASDHQ4L235 1098 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 GPRC6AQ5T6X5 926 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 GRAMD4Q6IC98 578 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 MACC1Q6ZN28 852 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 DPP10Q8N608 796 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 TRIML2Q8N7C3 387 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 GPR26Q8NDV2 337 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 ACDQ96AP0 544 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 RHBDF1Q96CC6 855 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 ADI1Q9BV57 179 aa12.65□□□□□ -0.38
CPSF6-201ENST00000266679 KIAA1522Q9P206 1035 aaPredicted RBP12.65□□□□□ -0.38
CPSF6-201ENST00000266679 TCF20Q9UGU0 1960 aaKnown RBP12.64□□□□□ -0.39
CPSF6-201ENST00000266679 HELZP42694 1942 aaKnown RBP12.64□□□□□ -0.39
CPSF6-201ENST00000266679 CROCCQ5TZA2 2017 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ANKRD28O15084 1053 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 RGS14O43566 566 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 TLL1O43897 1013 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
CPSF6-201ENST00000266679 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms