RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 PIGAP37287 484 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 CTSL3PQ5NE16 218 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 LRRC8DQ7L1W4 858 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 GPR150Q8NGU9 434 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 MYOCQ99972 504 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 NTN4Q9HB63 628 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 PARVBQ9HBI1 364 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 OLA1Q9NTK5 396 aaKnown RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 VPS9D1Q9Y2B5 631 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 TSC2P49815 1807 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 NYNRINQ9P2P1 1898 aaKnown RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 ELOVL7A1L3X0 281 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 PABPN1LA6NDY0 278 aaKnown RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 CXCR6O00574 342 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 PRMT5O14744 637 aaPredicted RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 WISP3O95389 354 aaPredicted RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 PRAMEF12O95522 483 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 NEK2P51955 445 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 ZNF140P52738 457 aaPredicted RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 CYP4F3Q08477 520 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 RGS21Q2M5E4 152 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 PDCD4Q53EL6 469 aaKnown RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 CACHD1Q5VU97 1274 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 MFSD14CQ5VZR4 134 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 UTS2BQ765I0 119 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 ZNF683Q8IZ20 524 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 EID3Q8N140 333 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 SCML4Q8N228 414 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 PNPT1Q8TCS8 783 aaKnown RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 UROC1Q96N76 676 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 RASSF1Q9NS23 344 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 CRLS1Q9UJA2 301 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 DYTNA2CJ06 578 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 STX16O14662 325 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 MITFO75030 526 aaPredicted RBP12.42□□□□□ -0.42
LIG1-201ENST00000263274 CBFA2T3O75081 653 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 INMTO95050 263 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 B3GALT4O96024 378 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 SERPINA1P01009 418 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 EPOP01588 193 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 MBL2P11226 248 aaPredicted RBP12.42□□□□□ -0.42
LIG1-201ENST00000263274 FSHRP23945 695 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 HOXD9P28356 352 aaPredicted RBP12.42□□□□□ -0.42
LIG1-201ENST00000263274 RGS4P49798 205 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 PLA2G16P53816 162 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 PWP1Q13610 501 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 TSTA3Q13630 321 aaPredicted RBP12.42□□□□□ -0.42
LIG1-201ENST00000263274 CARTPTQ16568 116 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 CYP2A13Q16696 494 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 IKZF5Q9H5V7 419 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 CARS2Q9HA77 564 aaKnown RBP12.42□□□□□ -0.42
LIG1-201ENST00000263274 FAM118AQ9NWS6 357 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 ITM2BQ9Y287 266 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 SLC45A1Q9Y2W3 748 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 RALGAPA2Q2PPJ7 1873 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 ZSWIM8A7E2V4 1837 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 OTCP00480 354 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 MAPKAPK2P49137 400 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 SGSHP51688 502 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 ADARB1P78563 741 aaKnown RBP12.42□□□□□ -0.42
LIG1-201ENST00000263274 CD47Q08722 323 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 DMPKQ09013 629 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 TYSND1Q2T9J0 566 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 PAGE2BQ5JRK9 111 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 ARMC12Q5T9G4 340 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 CST9Q5W186 159 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 ANGPTL8Q6UXH0 198 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 DLEU7Q6UYE1 221 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 ZNF420Q8TAQ5 688 aaPredicted RBP12.42□□□□□ -0.42
LIG1-201ENST00000263274 PYCR2Q96C36 320 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 C8orf48Q96LL4 319 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 PSKH2Q96QS6 385 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 FEM1AQ9BSK4 669 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 ARHGAP39Q9C0H5 1083 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 NDEL1Q9GZM8 345 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 MUC13Q9H3R2 512 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 PSME2Q9UL46 239 aa12.42□□□□□ -0.42
LIG1-201ENST00000263274 ABCB7O75027 752 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 DCKP27707 260 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
LIG1-201ENST00000263274 CLLU1OSQ5K130 101 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 C6orf141Q5SZD1 244 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 Q6ZNX1 250 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 GALNT7Q86SF2 657 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 ADCK1Q86TW2 530 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 SLCO6A1Q86UG4 719 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 SERPINA9Q86WD7 417 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 ALDH16A1Q8IZ83 802 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 SLC7A5P1Q8MH63 180 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 ZNF583Q96ND8 569 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 FUNDC2Q9BWH2 189 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 TDRD1Q9BXT4 1180 aaKnown RBP12.41□□□□□ -0.42
LIG1-201ENST00000263274 MAGEH1Q9H213 219 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 POPDC3Q9HBV1 291 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 RABL2AQ9UBK7 228 aaPredicted RBP12.41□□□□□ -0.42
LIG1-201ENST00000263274 TMA7Q9Y2S6 64 aaKnown RBP12.41□□□□□ -0.42
LIG1-201ENST00000263274 LOC730098B7Z3J9 87 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 hCG_2039718K7EN88 272 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 RGS14O43566 566 aa12.41□□□□□ -0.42
LIG1-201ENST00000263274 PRAMEF1O95521 474 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms