RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SKA2Q8WVK7 121 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 GPR78Q96P69 363 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 DERL2Q9GZP9 239 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 STMN4Q9H169 189 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 SENP1Q9P0U3 644 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 PCOLCE2Q9UKZ9 415 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 LMO7DNF2Z398 122 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 DFNA5O60443 496 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 KLHL2O95198 593 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 MATN4O95460 622 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 MPC1LP0DKB6 136 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 MAGOHP61326 146 aaKnown RBP15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 SPEM2Q0P670 501 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 ABRQ12979 859 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 UAP1L1Q3KQV9 507 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 CAPRIN2Q6IMN6 1127 aaKnown RBP15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 LRRC8EQ6NSJ5 796 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 WASH2PQ6VEQ5 465 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 KANSL1Q7Z3B3 1105 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 GKN2Q86XP6 184 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 MINDY1Q8N5J2 469 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 BANPQ8N9N5 519 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 FAM46DQ8NEK8 389 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 SAP25Q8TEE9 199 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 ATP6V1G3Q96LB4 118 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 SMC6Q96SB8 1091 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 WASH6PQ9NQA3 447 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 HCN4Q9Y3Q4 1203 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 CFAP20Q9Y6A4 193 aaKnown RBP15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 ARHGEF17Q96PE2 2063 aaPredicted RBP15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 OR52A4PA6NMU1 304 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 CDC7O00311 574 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 ZBTB14O43829 449 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 GIMD1P0DJR0 217 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 COL6A2P12110 1019 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 F3P13726 295 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 GLRBP48167 497 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 CCT8P50990 548 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 DEFB133Q30KQ1 61 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 AGAP9Q5VTM2 703 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 GATAD2AQ86YP4 633 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 SDR16C5Q8N3Y7 309 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 CFAP61Q8NHU2 1237 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 PATE1Q8WXA2 126 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 DLG3Q92796 817 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 PTERQ96BW5 349 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 INSM2Q96T92 566 aaPredicted RBP15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 NCDNQ9UBB6 729 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 ADAMTS6Q9UKP5 1117 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 DOLKQ9UPQ8 538 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 ACTL7BQ9Y614 415 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 CSNK1G3Q9Y6M4 447 aa15.44■□□□□ 0.06
CCDC90B-201ENST00000260054 RALGAPA1Q6GYQ0 2036 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 NPEPPSL1A6NEC2 478 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 IFRD1O00458 451 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 BTN3A1O00481 513 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 COPEO14579 308 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 YKT6O15498 198 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 SPAG7O75391 227 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 ANXA6P08133 673 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 TFEBP19484 476 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 ATP6V0D1P61421 351 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 FAM83EQ2M2I3 478 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 DUS1LQ6P1R4 473 aaKnown RBP15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 IYDQ6PHW0 289 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 ISCA2Q86U28 154 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 RASGRP3Q8IV61 690 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 NAGSQ8N159 534 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 ASB11Q8WXH4 323 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 APOPT1Q96IL0 206 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 C12orf66Q96MD2 445 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 C12orf65Q9H3J6 166 aaKnown RBP15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 NMRAL1Q9HBL8 299 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 PARD6AQ9NPB6 346 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 SEMA4GQ9NTN9 838 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 MKS1Q9NXB0 559 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 TMEM216Q9P0N5 145 aa15.43■□□□□ 0.06
CCDC90B-201ENST00000260054 TRBV23OR9-2A0A075B6M9 112 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 GFYI3L273 518 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 FFAR2O15552 330 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 TYROBPO43914 113 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 GLRA3O75311 464 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 CRHR1P34998 444 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 HALP42357 657 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 ATXN3P54252 364 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 ACAP2Q15057 778 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 OR4D1Q15615 310 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 TSNQ15631 228 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 RPE65Q16518 533 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 C16orf46Q6P387 395 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 LVRNQ6Q4G3 990 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 ZDHHC1Q8WTX9 485 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 TFGQ92734 400 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 KIAA1191Q96A73 305 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 ALKBH8Q96BT7 664 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 PHOX2BQ99453 314 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 ALG9Q9H6U8 611 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 RXFP3Q9NSD7 469 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 IMP3Q9NV31 184 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 ZNF624Q9P2J8 865 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms