RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 RFXANKO14593 260 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 PER2O15055 1255 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 DCLK1O15075 740 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 SERPINF2P08697 491 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 TYSND1Q2T9J0 566 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 C10orf120Q5SQS8 335 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 COLGALT2Q8IYK4 626 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 TMEM199Q8N511 208 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 HMGCLL1Q8TB92 370 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 PANX1Q96RD7 426 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 MROH8Q9H579 483 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 IPPKQ9H8X2 491 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 C8orf4Q9NR00 106 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 CBX4O00257 560 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 RAMP2O60895 175 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 SEC14L2O76054 403 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 MLYCDO95822 493 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 MYL3P08590 195 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 GADD45AP24522 165 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 PNPLA4P41247 253 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 CTSKP43235 329 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 LILRA4P59901 499 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 USP41Q3LFD5 358 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 CYP27C1Q4G0S4 372 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 CEP78Q5JTW2 689 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 Q6ZPB1 254 aaPredicted RBP12.13□□□□□ -0.47
USP30-201ENST00000257548 GPR65Q8IYL9 337 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 SLC34A3Q8N130 599 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 C2CD4AQ8NCU7 369 aaPredicted RBP12.13□□□□□ -0.47
USP30-201ENST00000257548 RNF167Q9H6Y7 350 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 RNF6Q9Y252 685 aa12.13□□□□□ -0.47
USP30-201ENST00000257548 OAS3Q9Y6K5 1087 aaKnown RBP12.13□□□□□ -0.47
USP30-201ENST00000257548 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
USP30-201ENST00000257548 C2orf81A6NN90 581 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 UGT2B11O75310 529 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 OPN1SWP03999 348 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 ALPLP05186 524 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 DNAJB2P25686 324 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 HTR2BP41595 481 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 KRT6CP48668 564 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 PRIM2P49643 509 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 HTR6P50406 440 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 DAOAP59103 153 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 ERVK-8P63133 956 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 CDK5R2Q13319 367 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 RFX4Q33E94 735 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 AGAP7PQ5VUJ5 663 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 TRIQKQ629K1 86 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 SMYD5Q6GMV2 418 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 OVOS1Q6IE37 1185 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 PDE12Q6L8Q7 609 aaKnown RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 PLET1Q6UQ28 207 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 SPATA19Q7Z5L4 167 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 CILP2Q8IUL8 1156 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 PELI3Q8N2H9 469 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 KRTCAP2Q8N6L1 136 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 OR6J1Q8NGC5 347 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 SELENOMQ8WWX9 145 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 GTPBP3Q969Y2 492 aaKnown RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 C12orf42Q96LP6 360 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 TMEM209Q96SK2 561 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 MMP28Q9H239 520 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 GPN2Q9H9Y4 310 aaPredicted RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 TAS2R9Q9NYW1 312 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 HSPB11Q9Y547 144 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 PIPSLA2A3N6 862 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 SOBPA7XYQ1 873 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 SERPINI2O75830 405 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 PCSK1P29120 753 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 ZNF484Q5JVG2 852 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 WDR45BQ5MNZ6 344 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 DOK6Q6PKX4 331 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 TMPRSS11AQ6ZMR5 421 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 MOB2Q70IA6 237 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 GPRIN1Q7Z2K8 1008 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 TMEM132CQ8N3T6 1108 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 LIX1Q8N485 282 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 WDR36Q8NI36 951 aaKnown RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 DIRAS2Q96HU8 199 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 TDRD1Q9BXT4 1180 aaKnown RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 VAPAQ9P0L0 249 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 NUFIP1Q9UHK0 495 aaKnown RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 ARID1BQ8NFD5 2236 aaPredicted RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 A0A1B0GTL3 188 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 GNG2P59768 71 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 DNAJB13P59910 316 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 IFITM3Q01628 133 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 C18orf21Q32NC0 220 aaPredicted RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 PLEKHG6Q3KR16 790 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 RBM23Q86U06 439 aaKnown RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 MINDY2Q8NBR6 621 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 OR6Q1Q8NGQ2 317 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 BARD1Q99728 777 aaKnown RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 NMRK2Q9NPI5 230 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 SDR39U1Q9NRG7 319 aaPredicted RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 INTS6Q9UL03 887 aaKnown RBP12.12□□□□□ -0.47
USP30-201ENST00000257548 SPATA2Q9UM82 520 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
USP30-201ENST00000257548 NUMA1Q14980 2115 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms